Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g0617 ATGGGTGCCTACAAGTATGTTTCTGAGCTATGGCGCAAGAAGCAATCTGATGTGATGCGATTAATGCAGCGTGTGAGGTGCTGGGAGTATCGTCAGCAATCCTCTATCGTTCGTCTCACCAGACCTACTCGTCCTGATATGGCTCGTCGTTTGGGTTACAAGGCTAAGCAGCCATATTCAGGTTTTCAACTCTCAACATTAGTTGATGTATTACATAAATATGCTCCTGAAGTTGATCTTTTGTCTTTTATAAAATCATCGCTCGATACACTTGAAGGCACCGATCATTACTGGTTAAACAGATCTGTTAAAAATGAAGAATTTTTTGGAATTCATGGAACTTTTTTAGTTCTTGCTGCAAACAATTTTGATTGCGGCATTATGTTTCAAAAATTGAAGACAATTCAGGAGAGGTTCCCTCATATTACTATTATGGGCATTAAACTAATTAATTCTTCGGATCGAGAGAACCAAATCCAGTTTCTGATGACAGAAAATATCACATTCCCTATTTTGTTGTCTCAGCGGACATTTCCTCAGATAAAGGAAGGTGCATGCTACATATTATTTAGAAATTTTAAGAACCCAAAGATTTACAATGAGAATGACGTCAGTCCCGAAATTTTATGCCAAGATATTCAGGAATTAAAGATGCAACCAAGTGATGATTCTGATTGGCTCAATGTTGTGAGGTCTACAACTTGGAGGCAGGATCTTATAGCTAAAGATGAATATATATGTTCTCCTCTACAGAATTTAGTTCTATATTACCCAGGTTGTGTCTCTGCAGATGAAAGTGCAAACCGCCTCTTCATTTCTGATTGCAATCATCATAGAATTATTGTATGTGATGACAATGGGAAGATTATGGATTGTATAGGCTCTTCCCCAGGATTTGAAGATGGTGATTTTGAATCTGCTAAATTAAGGCGTCCGGCTGGTTCTTATTACAATGCTACTGAGGATTGCTTATATTTTTTGGATTCAGAGAATCATGCTATAAGGAGAGCGGACATGGAAGCACGTCTAGTGGAAACTCTTTACCCGATAAGCACCGATAACAAGGGAGGTGGAATATTCAACTGGATCTTAAATAAGCTTGGTCTAGAAACCAGTGTGAGGAATATGGAAAAATCTGAAGTATTAGATCCGAAGCGGTTATATTTCCCTTGGCATCTGTTGAAATCTGATGATGATGACACTATATATATTATAGATCGCAGGTTTCAAACTTTATGGACCATGGATTCCGGTTCAGGAAAAGTAGACAAAATTTTTGAAGGTTCTCCTAAAATTCTTGAGATCTGCGGACAGCTAATCAGACAGAATTTATCCACCTTCGATAAGATTCCCTGTGACCAGTTTCAACAGAAAACTAATAATGTGTTTGCGCTGGATGGCCTCCCACATTCTGATCGTTTATCTTCATTGACAACGTTGCAGAATCACATGTTCATTTGTGATAAGGTTCGACAGAGGATTCTGAAGGTCAATATTGAATCTGGAGTTTGTTTGGATTTCGAGCTATCTAATTTTGGGTTACTTGGATTTCCTTATTGGTTGAATTCCCCTCTGGAGACATGTTATGCTGGTGGAAATGGACTTTCAGATACAGCAATTGATCATCTTCAACAATTTGATTTGCTACCAGGCAATATTGACATAAAGTTGAGTGTGGATGTTCATGCTGATATTGAGGTTGTAGAGCCACTACGTGAATCCTGTATATGGCGCCAAGCAAGAGGTGCAGCTGCTGAAATCACTGGAATGGATGATCCACGATCCATGGATAAGGTTGGAGTTGCACAACAGTGGTACGATGAATTGGATGATCTTGCCTCTCCAAAAGCTGATCCTGAATCTGAAGTGATTGAAGATGACCTGGATCAAAATACAGCTATGGAAGATGATAAAATTCGCATCAACAGTTGTGTCGGAACTAGCCCAGGAACAAGTGAGGTTATTATTTTCGCTGTACTGTATTGTAAACTTAGAAAAATTCCAAACACAAACTACGGTAACCAGGAGAAATATGCAGCAAGGATTCTTGATTTTCTGAGCTCAAAGAGATCTGGTAAAAGAGAGAGAGATTCATGGAATGCATATCTATTGCAATCTAAAGGTGATTTAAGAGATCTTATTTTCACTAAACTAGTACACATCAGAGTAAGAATAAATACTTCTGATCATCCTAAGGCTGAAAATGATAGGGATTTTATCTTAACAGACTCCACAATTAAGGTGAATGTGTTACTCAATTGA 2262 0.3833 MGAYKYVSELWRKKQSDVMRLMQRVRCWEYRQQSSIVRLTRPTRPDMARRLGYKAKQPYSGFQLSTLVDVLHKYAPEVDLLSFIKSSLDTLEGTDHYWLNRSVKNEEFFGIHGTFLVLAANNFDCGIMFQKLKTIQERFPHITIMGIKLINSSDRENQIQFLMTENITFPILLSQRTFPQIKEGACYILFRNFKNPKIYNENDVSPEILCQDIQELKMQPSDDSDWLNVVRSTTWRQDLIAKDEYICSPLQNLVLYYPGCVSADESANRLFISDCNHHRIIVCDDNGKIMDCIGSSPGFEDGDFESAKLRRPAGSYYNATEDCLYFLDSENHAIRRADMEARLVETLYPISTDNKGGGIFNWILNKLGLETSVRNMEKSEVLDPKRLYFPWHLLKSDDDDTIYIIDRRFQTLWTMDSGSGKVDKIFEGSPKILEICGQLIRQNLSTFDKIPCDQFQQKTNNVFALDGLPHSDRLSSLTTLQNHMFICDKVRQRILKVNIESGVCLDFELSNFGLLGFPYWLNSPLETCYAGGNGLSDTAIDHLQQFDLLPGNIDIKLSVDVHADIEVVEPLRESCIWRQARGAAAEITGMDDPRSMDKVGVAQQWYDELDDLASPKADPESEVIEDDLDQNTAMEDDKIRINSCVGTSPGTSEVIIFAVLYCKLRKIPNTNYGNQEKYAARILDFLSSKRSGKRERDSWNAYLLQSKGDLRDLIFTKLVHIRVRINTSDHPKAENDRDFILTDSTIKVNVLLN* 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g0617 753 Gene3D - 229 341 IPR011042 -
Mtr7g0617 753 SUPERFAMILY YWTD domain 251 505 - -
Mtr7g0617 753 Gene3D Ribosomal protein l15e 1 73 IPR024794 GO:0003735|GO:0005840
Mtr7g0617 753 PANTHER E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED 16 751 - -
Mtr7g0617 753 SMART Ribosomal_L15e_2 2 116 IPR000439 GO:0003735|GO:0005840|GO:0006412
Mtr7g0617 753 PANTHER NHL DOMAIN-CONTAINING PROTEIN 16 751 - -
Mtr7g0617 753 Pfam Ribosomal L15 2 59 IPR000439 GO:0003735|GO:0005840|GO:0006412
Mtr7g0617 753 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 1 59 IPR012678 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g0617 Mtr-Chr7 9378004 9388069 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g0617 1 59 Cytoplasmic Ribosomal Protein Gene Family AT4G17390 88.136 7.67e-31 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g0617 - - gmx:100806465 929.472