Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g0606 ATGAGCAAGGTCCTCATGTGGACCATCACAGCTCACACAACTTATGGGACATTGCACTCCTTTATCTTGAAGTCGAACTCTGAGGCTGTTCCAAAGAAAATTCTGGAGATCATGAATATACCAAACTTGACCAGAGAAAATGTAGCAGGTCACTTACAGTATATGATCACAATACTTGCAGAAGTATCGCATATTTCTGCGAGATGTTGCAGAGAAAGGAATGGTTGGAGGCTATCTCACAGAGCTCTAACATCAATGTTTGCATCAGGTCTATCGAGTTCTGTGATCAGAGAAATATTTGCATACACTTCAATATCAAACAAGAGGTACAAACAATGTTTGCATACACTGGCATATCAAACAAGAGGTACAAACAATGTTTTTAACCATTTTAACCAATTTCCAACACATCATGTTCCTCAAGTTAGGCTTGTAAAATCAAAGTTGGAAGCCGATGTTGTTGCGGAGAATAATGGCCATGGTCAAAACAGGTTTGGAATAAACTCTTCAAACCTTCCATTTTTTCAAGCAAAAACCTCATTCCATGATGGTGCTTCCACTAGCTTTTCATCATATAGAGGTGAACAAGGATTGATGGTTTCTTCTTCTTCAAGTTTCTTAGCAAGGGATTTTAAATTTGGTGACATTAGAAACCAAAATCACCGTGTTAAAAATTCAAACTTTGGATTTTTTATAAGAACTAATGTCATGCCTCATAAGTTTACTTCTGATGTAAGAAACAATAATCCTTTTGGAATTCAGCTGAATAATGGAGCAGAAATGGTTGGAATTGGAACTATGAACAATGGATTAAGGGCTCTAGTGAAAATAACAATGAAAGGAGTCAAAATGAAAATATGA 861 0.3647 MSKVLMWTITAHTTYGTLHSFILKSNSEAVPKKILEIMNIPNLTRENVAGHLQYMITILAEVSHISARCCRERNGWRLSHRALTSMFASGLSSSVIREIFAYTSISNKRYKQCLHTLAYQTRGTNNVFNHFNQFPTHHVPQVRLVKSKLEADVVAENNGHGQNRFGINSSNLPFFQAKTSFHDGASTSFSSYRGEQGLMVSSSSSFLARDFKFGDIRNQNHRVKNSNFGFFIRTNVMPHKFTSDVRNNNPFGIQLNNGAEMVGIGTMNNGLRALVKITMKGVKMKI* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g0606 286 SUPERFAMILY Homeodomain-like 5 55 IPR009057 -
Mtr7g0606 286 Gene3D - 2 59 - -
Mtr7g0606 286 PANTHER RESPONSE REGULATOR 23-RELATED 5 227 - -
Mtr7g0606 286 PANTHER TWO-COMPONENT RESPONSE REGULATOR 5 227 IPR045279 GO:0009736
Mtr7g0606 286 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 27 54 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g0606 Mtr-Chr7 9207747 9208862 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g0606 5 53 Response Regulator Gene Family AT3G16857 47.170 1.01e-07 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mtr7g0606 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g0606 - K14491 mtr:MTR_7g026400 315.079