Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g0580 ATGTCTTACTCGGATCATGGATACAAGTACGACGTGTTCATAAATTTCAGAGGGGAGGATACTCGCAGAACTATTGTTTCTCATCTCTATACTGCACTCTGTAACGCAGGAATCAACACTTTTCTTGATGATAAAAAGCTTGCAAAGGGAGAAGAGCTGGGACCAGAACTATATACAGCAATAAAAATGTCTCATATATTTATTGCTGTTTTCTCACCCAACTATGCACAATCTAGCTGGTGTCTTAACGAACTTGCACATATCATGGAATTGCGCCATCGCCGTCACAGTTATAGCCCCCGGGTGGTTATACCTCTATTTTATCATGTTGACCCATCAGATGTCCGTAAATTGAAGGGTGATTTTGGAAAAGGCTTGAAAGTTTCTGCAGATAAAATATTCTCACAGAGTGGGGCCGAAAGAGAAGAAGTTCTCATGTCCAAGTGGAGGAGAGCACTTGCTGAAGTTACAAATCTTGTTGGCTGGGATGCCAATAATTTCAGGAATGAAGGTGATTTGGTACAGAAACTTGTTGAGGACATTTTGACAAAACTAGATATGTCAGTGTTGTCTATTACTGAATTTCCAGTTGGATTGGAACCTCGCGTACAAAGCATTACCAAGATTCTTTATGATGAATCAAGGAAAGCCTGTATGATAGGATTATGGGGAATGGGTGGATCCGGGAAAACTACCTTGGCCAAAGCTATCTACAATCGAATCCATCGTGAATTCCAGGGTAAAACAAGTTTCATTGAAAGTATTCGAGAAGTTTGTGATTATAATAGAAAAGGGATTATTCATTTACAGGAACAACTTCTTTCAGATCTCCTAAAAACAAAAGATAAGATACATAGCATTGCAGTGGGGATAAATAAGATCGAGAAAAGACTTCAGGGACAAAAGGTTTTAATCGTACTTGATGATGTGACCAAGTCTGAGCAATTAAAAGCTCTGGGTGGAAATCCTAAGTTGTTTGGTTCAGGAAGTGTATTGATTATTACAACTAGAGATCGAAGCCATCTCGATTCACTTAGTGCCCGCGTCTTCACAATGATTGAAATGGATAAAAACGAGTCCCTTGAACTTTTCAGCTGGCATGCTTTTCGACAATCATGTCCTAGAAAAGATTTCGGTAAACTCTCTAGAAATGTGGTTTCTTATTGCAAAGGATTACCACTAGCTCTTGAAGTCCTTGGATCTTACTTATCTAAGAGGACAGAACAAGAATGGAGAAGTGCATTATCAAAATTAACGAAAATTCCCAACAACGAAGTGCTACAGATATTGAGAATCAGCTATGATGGTTTAGAAGATTATACAGAAAAGGATATATTTCTTGACATATGTTGTTTCTTCATTGGAAAGAACAGAGTTGATGTCACAGAGATCCTTAATGGTTGTGGACTTCATGCTGATATTGGAGTATCTGTTCTTATAGAGCGTAGCCTCATAAAAGTTGATAAGAATAACAAGTTTCAGATGCATGATTTACTACGCGACATGGGAAGAGCAATCGTCAGCGAAAGTTCAGCAAAAGAGCCTGAAAAGCATAGTCGATTGTGGTGTCATGAGGACGTGTTGGATGTCTTGTCAAAAAAAACTGGAACAAAAACTGTTGAGGGTTTGATTTTGAAGTGGCAAAGAACAGGCAGAATTTGCTTTGGCACTAATGCTTTCCAGGAGATGGAAAAACTGAGGCTTTTAAAACTTGATGGTGTTGACCTCATCGGAGATTATGGGTTAATTTCCAAACAACTGAGATGGGTTGATTGGCAAAGGTCTACCTTCACATTTATACCCAATGATTTTGATCAGGCAAATCTAGTTGTTTTTGAATTAAAATATAGCAATGTTAAACAAGTTTGGCAGGACACCAAGTTGTTGGAGAAGTTAAAAGTTCTCAAACTCAGTCATTCCAAGTACTTGAAAAGCAGTCCTGACTTTTCAAAATTACCAAATCTGGAAAAGCTAGTTATGAAGGATTGTCAAAGTCTGTCCAACGTACACCCGTCCATTGGAGATCTCAAGAATCTTCTTCTCATAAATTTAAAGGACTGTATAATTCTTGAAAATCTCCCAAGAGAGATCTATCAATTGAAATCGGTGAAAACTCTCATCCTTACGGGCTGTTCAACGATTGACAAATTGGAAGAAGATATAGTGCAGATGGAGTCCTTGACATCACTGATAACAACTGGTACATCTATAAAAGAAGTTCCCTATTCAATACTAAGATTAAGAAGTATTGTATATATATCCATATGTGGTTATGAAGGATTATCACATGAAGTTTTTCCTTCACTCATTCGGTTTTGGATGTCTCCTACTATAAATTCGTTACCACGTATTCCCCCTTTTGGAGGCATGCCGTTGTCTCTTGTTTCCTTGGATCTAGAGAATAATAATAATAATAATAATAATAATCTGAGCTGTCTAGTGCCCAAGCTTAATAGCTTTTCCGAACTTAGAAGTTTTCGAGTACAATGCCAGTCAATGATTCAACTAACCCGGGAATTAAGAAGATTTCTTGATGATCTATATGATGCAAATTTTACTGAACTGGAAACATCACACACATCACAAATCTCTGTTCTTTCATTAAGATCACTTTTGATTGGAATGGGTAGTTATCACACAGTCATAAATACTCTTGGCAAGAGTATATCACAGGAATTGAGAACAAATGATTCTGTCGATTATTTCCTTCCAGGAGACAATTATCCTTCTTGGTTGACCTATAGATGTGTAGGACCTTCAGTATATTTTGAAGTGCCTAACGGTGGTGTTTGTGGATTGAACGGAATAACTTTATGTGTTGTTTATTCATCAACACTTGAAAACATAGGAACTGAATGTCTCACTAGTGTCTTGATCATTAATCACACCAAATTCACAATCCATATTTGCAAGCGAGACACAGTAATGTCGTTTAATGATGAAGATTGGCAAGGTGTAGTATCAAATTTAGGAGTTGGTGACAATGTGGAGATTTTTGTTACTTTTAGACATGGATTGACAGTTAAGGAGACAGCTGTGTATCTAATATATAGTCAGTCGTCTACAAGGGAAATTGAGTCAATACTTGAAGTGGAGGCTGAGCCAACACCAGAAGTGGAAGCACAATCATCAACTGATGTGAAGGCCGAGCCATCACCAGAAGTCGAAGAACAACCATCACCACCTGATCTGAAAATGGAGCCATTACCAAAGCCAAATCAAAATATCTTTATAAGATTTGCAAAGGGAGTAGGAAAATGTTTATGCTTGAACCAAAATTGA 3282 0.3769 MSYSDHGYKYDVFINFRGEDTRRTIVSHLYTALCNAGINTFLDDKKLAKGEELGPELYTAIKMSHIFIAVFSPNYAQSSWCLNELAHIMELRHRRHSYSPRVVIPLFYHVDPSDVRKLKGDFGKGLKVSADKIFSQSGAEREEVLMSKWRRALAEVTNLVGWDANNFRNEGDLVQKLVEDILTKLDMSVLSITEFPVGLEPRVQSITKILYDESRKACMIGLWGMGGSGKTTLAKAIYNRIHREFQGKTSFIESIREVCDYNRKGIIHLQEQLLSDLLKTKDKIHSIAVGINKIEKRLQGQKVLIVLDDVTKSEQLKALGGNPKLFGSGSVLIITTRDRSHLDSLSARVFTMIEMDKNESLELFSWHAFRQSCPRKDFGKLSRNVVSYCKGLPLALEVLGSYLSKRTEQEWRSALSKLTKIPNNEVLQILRISYDGLEDYTEKDIFLDICCFFIGKNRVDVTEILNGCGLHADIGVSVLIERSLIKVDKNNKFQMHDLLRDMGRAIVSESSAKEPEKHSRLWCHEDVLDVLSKKTGTKTVEGLILKWQRTGRICFGTNAFQEMEKLRLLKLDGVDLIGDYGLISKQLRWVDWQRSTFTFIPNDFDQANLVVFELKYSNVKQVWQDTKLLEKLKVLKLSHSKYLKSSPDFSKLPNLEKLVMKDCQSLSNVHPSIGDLKNLLLINLKDCIILENLPREIYQLKSVKTLILTGCSTIDKLEEDIVQMESLTSLITTGTSIKEVPYSILRLRSIVYISICGYEGLSHEVFPSLIRFWMSPTINSLPRIPPFGGMPLSLVSLDLENNNNNNNNNLSCLVPKLNSFSELRSFRVQCQSMIQLTRELRRFLDDLYDANFTELETSHTSQISVLSLRSLLIGMGSYHTVINTLGKSISQELRTNDSVDYFLPGDNYPSWLTYRCVGPSVYFEVPNGGVCGLNGITLCVVYSSTLENIGTECLTSVLIINHTKFTIHICKRDTVMSFNDEDWQGVVSNLGVGDNVEIFVTFRHGLTVKETAVYLIYSQSSTREIESILEVEAEPTPEVEAQSSTDVKAEPSPEVEEQPSPPDLKMEPLPKPNQNIFIRFAKGVGKCLCLNQN* 1094
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g0580 1093 Gene3D - 354 438 IPR042197 -
Mtr7g0580 1093 SMART till_3 9 159 IPR000157 GO:0007165
Mtr7g0580 1093 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 1017 IPR044974 GO:0006952
Mtr7g0580 1093 PRINTS Disease resistance protein signature 219 234 - -
Mtr7g0580 1093 PRINTS Disease resistance protein signature 297 311 - -
Mtr7g0580 1093 PRINTS Disease resistance protein signature 389 403 - -
Mtr7g0580 1093 PRINTS Disease resistance protein signature 627 643 - -
Mtr7g0580 1093 Pfam NB-ARC domain 202 428 IPR002182 GO:0043531
Mtr7g0580 1093 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 162 IPR035897 -
Mtr7g0580 1093 Gene3D - 188 353 IPR027417 -
Mtr7g0580 1093 SUPERFAMILY L domain-like 494 831 - -
Mtr7g0580 1093 MobiDBLite consensus disorder prediction 1032 1071 - -
Mtr7g0580 1093 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 449 IPR027417 -
Mtr7g0580 1093 Gene3D - 7 187 IPR035897 -
Mtr7g0580 1093 ProSiteProfiles TIR domain profile. 8 185 IPR000157 GO:0007165
Mtr7g0580 1093 Pfam TIR domain 9 191 IPR000157 GO:0007165
Mtr7g0580 1093 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 13 1017 - -
Mtr7g0580 1093 Gene3D Ribonuclease Inhibitor 535 870 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g0580 Mtr-Chr7 8791735 8796634 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g0580 10 747 WRKY Transcription Factor Family AT4G12020 29.281 7.22e-72 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g0580 - - mtr:MTR_2g437560 1338.17