Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g0574 ATGACTTCCTCGAACAAACATTGGCCTAGCATGTTCAAGAAGTCTACCAATGCGTCCAACCAACGGAATTCTCAAGGCCTCAACTCTTCCCTCTTAACTGGTGGAGATGGCGAAGAGAGAACTCCAGAACCAAAGCCAAGATGGAACCCAAAACCACAACAAATTCGCATTCTCGAAGCCATTTTCAACTCAGGGATGGTGAACCCACCAAGGGAGGAAATTACGAAGATACGTGAACAATTACAAGAGTTTGGTCAAGTTGGTGATGCCAATGTCTTTTACTGGTTTCAAAACCGCAAGTCTCGAAGCAAACAAAAGAAAAGATTCATCCACAACAAGAAACGAGAAACACAACAAAACTCTGGTCATCAAACACTCACATCACCACCCAACTCATCATCATCATCTTCTTCTGGTCATCAAAAAGCTTCTCCCGATGAAATTGTAATTTCGAACAATATCGGATTCTCCAATGCTAATGATGGGATGGTGGTGTTTTCTAATTCACCCGCAGTCTCGGTGAACCAAAACCAAGTTGATGCTTATTTTCAAACCCCTACTGGAACCGATTTACAACTACCTACACCCCCATTTTTCTCTTTCCCTGTGCAGAATCATATTAATGAAGTAGTGCCTAATGCCATGACACCACCACATAGGTTTAATCACTTATCTGGTTTCATGAACTATGGAAGTGAAAATGGAAACTCCTCAATGGTTCAACCCTTACCTCAACAGAATGTTGATGTACCTCTAGTTAATCATGAGATCACCATGAACTATGGAAGTAAAAGTGGAATTGCCTCAATGAATCACCGATATGATCAAGAGAAGATTCAAGAGGAAGCAATGAATATGATTCACATGTACCAGCAAGACCCACAACTTAATTTTGGTGTTGCTACAACATCAAGCAATGATGATGAGTCAGTTGATCTTGCTCCTCTTCCTCCTACTACCATTGGTGCACCTGATGCTGTTCCATTCCCCATTATTGATCATCGACATCAAGGATTTGGTGTGGAAGATGAAGCGGAAAAATGTATGGTGATTACTAAGGACGCCGCATTCAAGGTTGATGCAGGGCCCTTTAACGTTCGTGCATCCTTTGGAGATAGAGCAGTTCTCTTTGACTCCTCTGGTACTCCAGTTCTAACAGATGAGTGGGGTGTTACCCTCGATTCGCTCCACCATGGTGCTGAGTATTACCTGATTTATCAATGA 1224 0.4232 MTSSNKHWPSMFKKSTNASNQRNSQGLNSSLLTGGDGEERTPEPKPRWNPKPQQIRILEAIFNSGMVNPPREEITKIREQLQEFGQVGDANVFYWFQNRKSRSKQKKRFIHNKKRETQQNSGHQTLTSPPNSSSSSSSGHQKASPDEIVISNNIGFSNANDGMVVFSNSPAVSVNQNQVDAYFQTPTGTDLQLPTPPFFSFPVQNHINEVVPNAMTPPHRFNHLSGFMNYGSENGNSSMVQPLPQQNVDVPLVNHEITMNYGSKSGIASMNHRYDQEKIQEEAMNMIHMYQQDPQLNFGVATTSSNDDESVDLAPLPPTTIGAPDAVPFPIIDHRHQGFGVEDEAEKCMVITKDAAFKVDAGPFNVRASFGDRAVLFDSSGTPVLTDEWGVTLDSLHHGAEYYLIYQ* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g0574 407 SMART HOX_1 43 110 IPR001356 GO:0003677
Mtr7g0574 407 MobiDBLite consensus disorder prediction 1 35 - -
Mtr7g0574 407 MobiDBLite consensus disorder prediction 119 144 - -
Mtr7g0574 407 SUPERFAMILY Homeodomain-like 40 108 IPR009057 -
Mtr7g0574 407 MobiDBLite consensus disorder prediction 1 53 - -
Mtr7g0574 407 CDD homeodomain 44 107 IPR001356 GO:0003677
Mtr7g0574 407 Pfam Homeodomain 45 105 IPR001356 GO:0003677
Mtr7g0574 407 ProSiteProfiles 'Homeobox' domain profile. 41 106 IPR001356 GO:0003677
Mtr7g0574 407 PANTHER WUSCHEL-RELATED HOMEOBOX 9 1 405 IPR044557 GO:0003700|GO:0050793
Mtr7g0574 407 MobiDBLite consensus disorder prediction 104 144 - -
Mtr7g0574 407 Gene3D - 45 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g0574 Mtr-Chr7 8705216 8709351 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g0574 1 115 Wox Gene Family AT2G33880 64.000 2.94e-47 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Mtr7g0574 Homeodomain 6.8e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g0574 - - mtr:MTR_7g025010 806.208