Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g0518 ATGGTGGGTAACGACGATGCTCGAGCTCCATGCCACCTTTCAAATTCCCGGAAAATGTTTTGGCGTTCAGCTTCATGGTCTTCCGCCCGTTCCGCCGCCACATCAAATCCCTCCGGTGAACCGGAATCGAATTTCACCGATCCGAATTCCGGCGGTGGTGGTGGAGATAATACTAACCGGAGATTTCCTCCACCGCCTTTGACGCCAAGGTCACAGCAGAATTGTAAGGCAAGATCATCATGTCTGCCGCCCCTTCAGCCACTTTCGATTGCTCGCCGAAGTTTGGATGAGTGGCCGAAAGCGAGCTCCGATGATATCGGGGAGTGGCCACAACCACCTATTACTCCTGGTGGGAGAGGTAATGGTAATGGTAATAGCAGTAGTAATAGTAATAGTAGTAATAATAATGGTGAAAGGTTGAAACTTGATTTGTCTACAATTCAGCAGAATAATAATCCTGATAGTAGAAATAACGGTGGACTTGTGAAGAGAGATAAAATTGCTTTTTTTGATAAAGAATGTTCTAAAGTTGCTGAACATGTTTATCTTGGTGGTGATGCTGTTGCTAAAGATAGGGAAATTTTGAAAAGGAATGGGATTACTCATGTTTTGAATTGTGTTGGTTTTGTGTGTCCTGAGTATTTTAAAGGTGATTTTGTGTATAGGACTTTGTGGTTACAAGACAGTCCTAGTGAGGATATTACTAGTATATTGTATGATGTGTTTGATTACTTTGAGGATGTTAGGGAAAAGAATGGGAGGGTGTTTGTTCATTGTTGTCAAGGGGTGTCGAGGTCGACGTCTCTTGTTATTGCTTATCTTATGTGGAGGGAAGGACAGAGTTTTGATGATGCTTTTCAGTTTGTGAAGGCGGCGAGGGGTATTGCTGATCCGAATATGGGTTTCGCTTGTCAGTTGTTACAGTGTCAGAAAAGGGTTCATGCAGTTCCTCTTAGTCCGAGCTCGTTGTTGAGAATGTATAGGATTGCTCCTCACTCGCCGTATGATCCTTTGCATCTTGTTCCGAAGATGTTGACGGATCCGTCTTTGTCTGCTTTGGATTCTAGGGGTGCGTTTATTGTGCACATTCCTTCGGCATTATATGTTTGGATTGGTAAGTATTGTGCGGCTATCATGGAAAGGGATGCTAGAGGGGCTGCGGATCAGATTGTCCGGTATGAGAGAGTGCAAGGATCGATTATCATGATTAAGGAAGGTGAGGAACCACCTTCATTTTGGGATGCTTTTTCGAAGTTTTTGCCTTTGATGGACATGCCTGGGAATAGAGTAGAAAGTTACAAATCAAGTGTTAGAATTTTTCCTGGTGAGAGGAAAGTGGATGCGTTCGATGTTGATTTTGAAGTTTTCAGAAAAGCCATCGTGGGAGGTTTTGTGCCTCCGTTTGCATCATCGGAGAATGATCATGAAACCCATCTTCCTGCACGAGAGAGTAGTTGGAGTGTTTTAAGGCGGAAAAATTCCTGTCCTGATGTGAAGGAGTTTCTCTCAGCCCCTAAGTTATCATTGCCGCGAGTTTATTCAGATTCCATGTTGTGCATTCATGCATCTGCAAATTCATTTCCATCACCGTCAATGTTGTCAACTGACTCATCTTTATCATCTTCCTCTTCACCTCCTTTTGTTTCTCCAGATTCCATTTCTTCTGATTCTAGCAATCACTCAAAGTTGTTGTTAGAATTATCCCCAGATTCTTCTTCTCTCGTTTTTACTCCCGTCCCAGTATCTTCATCTTTGTCTAGCTTCTCTAATTTGTCCCTCTTGTCAAATTATAGTTCTCAACCAGTGTCTAACTGTACAGATATCCATGGTGTCAAGTTATCGCCACATCTATGTTCTCGATCTGCCTCTTTACCATTGAAAAAACCATCAACTTCCATTGCTGAACGCAGAGGTAGTTTATCGAAGTCTTTGAAGTTGCCTCTCATGAATGATAACACAAAAGTAATAGATAAACCATCAACTATTCCTTCCAGTCGGGAACATGGTGTTCTTGCCAGCAGCAAATTTAGCTGTATGCAAGATTCAGACAGTATAGAGTATTTGTTCGAGTCCACTGCTAATGTCAAAAATGGAGGTATGAATTCAATTCAACAGTGTGAACCAGCATCGTGTCCAGACATTGCTGATTGCGTGGGCTGCAATGAATTATCGGTTCTCAGGAACTGTGTTGAACCTTCAGTAGATAGTTTATCTGGAGAAGATTTGAAGTCTGCATCATCAAAGGGAAATTACGAGAGTGGCTCGTCGCAATGTAGTAAGATACAAAGTTTAGTATATCGCTGGCCAAGTTTAGAAAAGATCGAGGCATTTGGTGCAAATCATTTGGGTTCAGAGGCTGCTTTTGCTGTATTCTCTCCAAGCATACACATGCATGCAAGAAACATTTTGTATATTTGGGTAGGGAGTTCTTTCAAACTGGATGCTTCGCAGGTTCGGTTAGATAGTGATAGACGGTCTGATTTGATTGGGGCAGTTGACTGGAACAAAATTGGTTGTGATCTTCTTGCTCAGTTTAATTTGCCGCACAATACAGTCACTAAGATTGTTAAAGAGAATGAAGAACCACAAGAGTTCCTTGCTCTGCTGAGTTCATTGTAG 2619 0.4227 MVGNDDARAPCHLSNSRKMFWRSASWSSARSAATSNPSGEPESNFTDPNSGGGGGDNTNRRFPPPPLTPRSQQNCKARSSCLPPLQPLSIARRSLDEWPKASSDDIGEWPQPPITPGGRGNGNGNSSSNSNSSNNNGERLKLDLSTIQQNNNPDSRNNGGLVKRDKIAFFDKECSKVAEHVYLGGDAVAKDREILKRNGITHVLNCVGFVCPEYFKGDFVYRTLWLQDSPSEDITSILYDVFDYFEDVREKNGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQFVKAARGIADPNMGFACQLLQCQKRVHAVPLSPSSLLRMYRIAPHSPYDPLHLVPKMLTDPSLSALDSRGAFIVHIPSALYVWIGKYCAAIMERDARGAADQIVRYERVQGSIIMIKEGEEPPSFWDAFSKFLPLMDMPGNRVESYKSSVRIFPGERKVDAFDVDFEVFRKAIVGGFVPPFASSENDHETHLPARESSWSVLRRKNSCPDVKEFLSAPKLSLPRVYSDSMLCIHASANSFPSPSMLSTDSSLSSSSSPPFVSPDSISSDSSNHSKLLLELSPDSSSLVFTPVPVSSSLSSFSNLSLLSNYSSQPVSNCTDIHGVKLSPHLCSRSASLPLKKPSTSIAERRGSLSKSLKLPLMNDNTKVIDKPSTIPSSREHGVLASSKFSCMQDSDSIEYLFESTANVKNGGMNSIQQCEPASCPDIADCVGCNELSVLRNCVEPSVDSLSGEDLKSASSKGNYESGSSQCSKIQSLVYRWPSLEKIEAFGANHLGSEAAFAVFSPSIHMHARNILYIWVGSSFKLDASQVRLDSDRRSDLIGAVDWNKIGCDLLAQFNLPHNTVTKIVKENEEPQEFLALLSSL* 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g0518 872 Pfam Dual specificity phosphatase, catalytic domain 181 311 IPR000340 GO:0008138|GO:0016311
Mtr7g0518 872 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 232 293 IPR000387 GO:0016311|GO:0016791
Mtr7g0518 872 SUPERFAMILY Actin depolymerizing proteins 320 423 - -
Mtr7g0518 872 PANTHER PROTEIN-TYROSINE-PHOSPHATASE MKP1 1 866 - -
Mtr7g0518 872 SMART VILL_6 322 419 IPR007122 GO:0051015
Mtr7g0518 872 MobiDBLite consensus disorder prediction 735 755 - -
Mtr7g0518 872 Gene3D Protein tyrosine phosphatase superfamily 147 315 IPR029021 -
Mtr7g0518 872 MobiDBLite consensus disorder prediction 118 138 - -
Mtr7g0518 872 MobiDBLite consensus disorder prediction 739 755 - -
Mtr7g0518 872 PANTHER MKPA PROTEIN 1 866 - -
Mtr7g0518 872 ProSiteProfiles Dual specificity protein phosphatase domain profile. 173 315 IPR020422 GO:0006470|GO:0008138
Mtr7g0518 872 SMART dsp_5 173 312 IPR020422 GO:0006470|GO:0008138
Mtr7g0518 872 MobiDBLite consensus disorder prediction 96 138 - -
Mtr7g0518 872 MobiDBLite consensus disorder prediction 534 554 - -
Mtr7g0518 872 MobiDBLite consensus disorder prediction 22 56 - -
Mtr7g0518 872 ProSitePatterns Tyrosine specific protein phosphatases active site. 257 267 IPR016130 GO:0016311|GO:0016791
Mtr7g0518 872 MobiDBLite consensus disorder prediction 22 83 - -
Mtr7g0518 872 CDD DSP 174 308 - -
Mtr7g0518 872 Gene3D Severin 324 420 IPR029006 -
Mtr7g0518 872 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 168 314 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g0518 Mtr-Chr7 8021605 8027063 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g0518 1 209 Protein tyrosine phosphatase (PTP) family AT3G55270 57.277 3.81e-61 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g0518 - - mtr:MTR_7g023250 1626.68