Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g0515 ATGGCATCCAAATCCTTCAGCATCTCTGCCACTTCACAAGATGAAGGTGATTCTTCCCACACAAAAGAAGGTGTGAATATGAAGGCCAATGAAGATCAACCATCAAAATCAAATTCCAACAAGTCTGTCGGTTCGGTAAAGTTATCGAAAGATGATGTTGTTAGCCCTAACAGCAATGATGGGAAAGATAAGAAGAAGTATTTTACATGCTCGTATTGCAAGGGGCAATTTTCTACTTTCCAAGGCTTAGGAGGGCATCAAAATGCCCATAAGGCAGAACGTGCATTGGAAAAACAACTAAAAGAAAGGTATGATGCTGGTGCTTTAGGTTTAGGGCAATCTCACTTTAAACCTTATTTAAATTATTCTAGTACTCTTTTTACACCTTATAATAATTATAGGGGCCTTGGTGTTAGAATGGAGACAACAATTCAAAAACCAACTTATACTAACCCTAGGTTTATCCCAACTGGTTCTGGATATGGTTATGGTAATTTGCGTTTGAATCAGATGTTACACCCTTCACTTTTTAACTTCAGAAATAATATTGAGGCTAGTAATACTGGAGTTGGAACTCTAGGTTTTGGTGGAGCAAGTACTTCAAGAATTGGTGCTATTCTAAAACTTGGAGATTCTTCTATTGCTACAAGTTCAAGCTCAAACACAAACAAGGAAAATGTCGTGGCTACTACTTCTGCAATGGATGATGATACTGATCATGATTCAAAATCAAACATTGAAGAAGAACCCTCCGATTTGGATTCGTCTGGACTCGACTTAACACTTAGGCTTTAA 795 0.3774 MASKSFSISATSQDEGDSSHTKEGVNMKANEDQPSKSNSNKSVGSVKLSKDDVVSPNSNDGKDKKKYFTCSYCKGQFSTFQGLGGHQNAHKAERALEKQLKERYDAGALGLGQSHFKPYLNYSSTLFTPYNNYRGLGVRMETTIQKPTYTNPRFIPTGSGYGYGNLRLNQMLHPSLFNFRNNIEASNTGVGTLGFGGASTSRIGAILKLGDSSIATSSSSNTNKENVVATTSAMDDDTDHDSKSNIEEEPSDLDSSGLDLTLRL* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g0515 264 MobiDBLite consensus disorder prediction 1 15 - -
Mtr7g0515 264 MobiDBLite consensus disorder prediction 214 233 - -
Mtr7g0515 264 Pfam C2H2-type zinc finger 67 92 - -
Mtr7g0515 264 MobiDBLite consensus disorder prediction 234 250 - -
Mtr7g0515 264 PANTHER ZINC FINGER PROTEIN KNUCKLES 40 264 - -
Mtr7g0515 264 MobiDBLite consensus disorder prediction 1 60 - -
Mtr7g0515 264 ProSitePatterns Zinc finger C2H2 type domain signature. 70 90 IPR013087 -
Mtr7g0515 264 MobiDBLite consensus disorder prediction 30 55 - -
Mtr7g0515 264 MobiDBLite consensus disorder prediction 214 264 - -
Mtr7g0515 264 PANTHER ZINC FINGER PROTEIN JAGGED 40 264 IPR045320 GO:0003700
Mtr7g0515 264 Gene3D Classic Zinc Finger 41 109 - -
Mtr7g0515 264 ProSiteProfiles Zinc finger C2H2 type domain profile. 68 95 IPR013087 -
Mtr7g0515 264 SUPERFAMILY beta-beta-alpha zinc fingers 65 96 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g0515 Mtr-Chr7 7930719 7931513 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g0515 22 171 C2H2 Transcription Factor Family AT5G25160 28.667 9.85e-13 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g0515 - - mtr:MTR_7g022980 457.218