Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g0514 ATGGCATCCAAATCCTTCAGCATCTCTGCCACTTCACAAGATGAAGGTGGTTCTTCCCACACAAAAGAAGAGGTGAACATGAAGGAGAATGGAGATCAACCATCAAAATCAAATTCCAACAAGTCTGTCGGTTCGGTAAAGTTATCGAAAGATGATGTTGTTAGCCCTAACAGCAATGATGGGAAAGATGAGAAGAAGTATTTTACATGCTCGTATTGCAAGGGGCAATTTTCTACTTTCCAAGGCTTAGGAGGGCATCAAAATGCCCATAAGGCGGAACGTGCGTTGGAAAAACAACGTAAAGAAAGGTATGATGCTGGTGCTTTAGGTTTAGGGCAATCTCACTTTAAACCTTATTTCAATTATTCTAGTACTCTTTTTACACCTTATAATAATTATAGGGGCCTTGGTGTTAGAATGGAGACAACAATTCAAAAACCAACTTATACTAACCCTAGGTTTATCCCAAATGGTTCTGGATATGGTTATGGTAGTTTGCGTTTGAATCAGATGTTACACCCTTCACTTTTTAACTTCAGAAATAATATTGAGGCAAGTAATACTGGAGTAGGAACTCTAGGTTTTGGTGGAGCAAGTACTTCAAGAATTGAAGATGGTACAAATAATAAAATTGGTGCTATTCTAAAACTTGGAGATTCTTCTATTGCTACAAGTTCAAGCTCAAACACAAACAAGAAAAATGTTGTGGCTGCTACTTCTGCAATGGATGATGATACTGATCATGATTCAAAGTCAAACATTGAAGAAGAACCCTCCGATTCAGAATCTTCTGGACTGGATTTAACACTCAGGCTTTAG 819 0.381 MASKSFSISATSQDEGGSSHTKEEVNMKENGDQPSKSNSNKSVGSVKLSKDDVVSPNSNDGKDEKKYFTCSYCKGQFSTFQGLGGHQNAHKAERALEKQRKERYDAGALGLGQSHFKPYFNYSSTLFTPYNNYRGLGVRMETTIQKPTYTNPRFIPNGSGYGYGSLRLNQMLHPSLFNFRNNIEASNTGVGTLGFGGASTSRIEDGTNNKIGAILKLGDSSIATSSSSNTNKKNVVAATSAMDDDTDHDSKSNIEEEPSDSESSGLDLTLRL* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g0514 272 Pfam C2H2-type zinc finger 67 92 - -
Mtr7g0514 272 PANTHER ZINC FINGER PROTEIN KNUCKLES 40 272 - -
Mtr7g0514 272 MobiDBLite consensus disorder prediction 223 272 - -
Mtr7g0514 272 MobiDBLite consensus disorder prediction 1 16 - -
Mtr7g0514 272 MobiDBLite consensus disorder prediction 242 258 - -
Mtr7g0514 272 MobiDBLite consensus disorder prediction 223 237 - -
Mtr7g0514 272 ProSitePatterns Zinc finger C2H2 type domain signature. 70 90 IPR013087 -
Mtr7g0514 272 PANTHER ZINC FINGER PROTEIN JAGGED 40 272 IPR045320 GO:0003700
Mtr7g0514 272 MobiDBLite consensus disorder prediction 31 55 - -
Mtr7g0514 272 ProSiteProfiles Zinc finger C2H2 type domain profile. 68 95 IPR013087 -
Mtr7g0514 272 Gene3D Classic Zinc Finger 41 109 - -
Mtr7g0514 272 SUPERFAMILY beta-beta-alpha zinc fingers 65 96 IPR036236 -
Mtr7g0514 272 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g0514 Mtr-Chr7 7922974 7923792 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g0514 38 171 C2H2 Transcription Factor Family AT5G25160 32.836 2.51e-13 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g0514 - - mtr:MTR_7g022980 527.324