Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g0513 ATGGCATCCAAATCCCTTAGCATCACTGCCACTTCACAAGATGAAGGTGATTCTTTCCACACAAAAGAAGGGGTGAGCATGAAGGCGAATGAAGATCAACCCTCAAAATCAAATTCCAGTGAGTCTGTCGATTCGGTAAAGCTATCGAAACATGATGTTGTTAGCCCTATTCAAGTTGGTTCAACATCTTCTTTTCATAATAACAGCAATGAAAGGAAAGATGAGAAGAAGAACGAAGAGAAGATCTCGGATGTGAAGTATTTTTCATGCTCCTATTGCAAGGGGCAATATTCTACTTTACAAGGGTTAAGAGGGCATCAAAATGCCCATAAAGCAGAACGTGCAATGGAAAAACAACGTAAAGAAATGTATAATGTTGGTGCTTTAGGTTTAGGGCAATCTCACCTTAAACCTTATATCATTGATTCTAGTGCTTCTTTTATACCTTATAATAATTATAGGGGCCTTGGTGTTAGAATGGAGTCAACAATTCAAAAACCACCTTATACTAACCCTAGGATTACCCCAAATGGTTCTAAATATGGTTATGGTGCTTTGCGTTTGAATGATGTATTACACCCTTCACTTTTTAATTTGAGAAATAATATTGAGGCTAGTAATACTGGTGTAGGAACTCTAGGTTTTGGTGGAGCAAGTACTTCAAGAATTAAAGATGGTACAAATAATAAAATTGGTGCTATTCTAAAACTTGGTGATTCTTCTACTGCCACAAGTTCAAGCTCAAACACAAACAAGAAAAATGTTGTGGCTACTACTTCTGCAATGGATGATGATATAAAGTCAAACATTGAAGAAGAACCCTCCAATTTTGACTCTTCTGAACTTGACTTAACACTCAAGCTTTAG 867 0.3679 MASKSLSITATSQDEGDSFHTKEGVSMKANEDQPSKSNSSESVDSVKLSKHDVVSPIQVGSTSSFHNNSNERKDEKKNEEKISDVKYFSCSYCKGQYSTLQGLRGHQNAHKAERAMEKQRKEMYNVGALGLGQSHLKPYIIDSSASFIPYNNYRGLGVRMESTIQKPPYTNPRITPNGSKYGYGALRLNDVLHPSLFNLRNNIEASNTGVGTLGFGGASTSRIKDGTNNKIGAILKLGDSSTATSSSSNTNKKNVVATTSAMDDDIKSNIEEEPSNFDSSELDLTLKL* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g0513 288 PANTHER ZINC FINGER PROTEIN JAGGED 60 288 IPR045320 GO:0003700
Mtr7g0513 288 ProSiteProfiles Zinc finger C2H2 type domain profile. 88 115 IPR013087 -
Mtr7g0513 288 MobiDBLite consensus disorder prediction 1 15 - -
Mtr7g0513 288 MobiDBLite consensus disorder prediction 1 79 - -
Mtr7g0513 288 ProSitePatterns Zinc finger C2H2 type domain signature. 90 110 IPR013087 -
Mtr7g0513 288 PANTHER ZINC FINGER PROTEIN KNUCKLES 60 288 - -
Mtr7g0513 288 SUPERFAMILY beta-beta-alpha zinc fingers 86 116 IPR036236 -
Mtr7g0513 288 MobiDBLite consensus disorder prediction 30 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g0513 Mtr-Chr7 7916238 7917104 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g0513 80 175 C2H2 Transcription Factor Family AT1G80730 32.710 5.58e-11 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g0513 - - mtr:MTR_7g022980 390.963