Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g0491 ATGGAGAATCATAACAATAATAACAAGCGAAAGGTCATCGTGATGGATGAATCCCATGTTGAAACTAAGAATTCAAAGTCTCCCCAAAAAGATATTCCTGAAAAAGAATCAATCGATTCACCCAAAGAAATTTCTCCATTTCTTCTTTTTGGATTCATTGTTAATCATAGGAAAGGAATTCAAAATGCTTACTCGTGCAAATTTTGTAGCAGAAAGTTCACTGCTCCACATGCATTAGGTGGCCATCAAAGTTCTCACAAATTTGACAAAAGCCTGGTCAAAAAAAGGATCCAAGCTTTTAACGAAACTTGGATGAATTACTCAAATGGGTCAACAAACTTCCATGCAAGAAATTTGTATGGTGCATTGCCGCATGTTCCACATATAGATGGAGTTAATGAGGCTGATCAAGGCATTGCGAGTCATCATAAAGTTAATATGACTGAGATTGCAGAGGGAGGTGTTGTTAGTGATGAAGTTGATTAG 486 0.3683 MENHNNNNKRKVIVMDESHVETKNSKSPQKDIPEKESIDSPKEISPFLLFGFIVNHRKGIQNAYSCKFCSRKFTAPHALGGHQSSHKFDKSLVKKRIQAFNETWMNYSNGSTNFHARNLYGALPHVPHIDGVNEADQGIASHHKVNMTEIAEGGVVSDEVD* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g0491 161 Gene3D Classic Zinc Finger 49 114 - -
Mtr7g0491 161 PANTHER ZINC FINGER PROTEIN JAGGED 1 124 IPR045320 GO:0003700
Mtr7g0491 161 ProSiteProfiles Zinc finger C2H2 type domain profile. 64 91 IPR013087 -
Mtr7g0491 161 PANTHER EXPRESSED PROTEIN 1 124 - -
Mtr7g0491 161 MobiDBLite consensus disorder prediction 1 38 - -
Mtr7g0491 161 ProSitePatterns Zinc finger C2H2 type domain signature. 66 86 IPR013087 -
Mtr7g0491 161 SUPERFAMILY beta-beta-alpha zinc fingers 62 91 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g0491 Mtr-Chr7 7586642 7587218 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g0491 63 121 C2H2 Transcription Factor Family AT5G57520 40.000 1.35e-08 49.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mtr7g0491 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g0491 - - mtr:MTR_7g022270 336.65