Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g0480 ATGGTATGTATATGTGAGAATGATGAGAATGAATATTCTCAATCCACACTGGATTGGATCAGCAATCCAGAAAACTTGCTCAACAAGGCATCTGAAATCGGTGAAGGAGTGTTTGGAACAGTTTTCAAAGTTCCATTGGGATCACAACAAGGAAGAAATGTTGCAATCAAGAAACTTATCACATCAAACATTCTTCAATATCCAGAAGACTTCGACAGGGAAGTTAGAATTATAGGAAACGCCAGACATCCAAATTTGATTGCGTTGAAAGGATACTATTGGACTCCTCAACTACAGCTTTTAGCATCTGAATTTGCACCAAATGGTAACTTGCAATCCAAGTTACATGAAAAGCTTCCTTCAAGTCCACCACTTTCTTGGCCAAATAGATTCAAGATTTTACTTGGAACAGCAAAGGGACTTGCACATTTGCATCATTCATTCAGGCCACCAATAATTCACTGCAACATAAAACCAAGCAACATCTTACTTGATGAAAACTTCAACGCTAAGATATCAGATTTCGGATTAGCTAGGCTATTATCAAAGCTAGACAAGCATGTGATGAGTAACAGGTTTCAAAGTGCATTAGGCTATGTAGCACCTGAACTAGCTTGTCAGAGCTTAAGGGTCAATGAGAAATGTGATGTGTATGGCTTTGGCGCATCAACCAATGATATATATTACACCAATATGTTTCAACTATTAAAACCCTAA 717 0.378 MVCICENDENEYSQSTLDWISNPENLLNKASEIGEGVFGTVFKVPLGSQQGRNVAIKKLITSNILQYPEDFDREVRIIGNARHPNLIALKGYYWTPQLQLLASEFAPNGNLQSKLHEKLPSSPPLSWPNRFKILLGTAKGLAHLHHSFRPPIIHCNIKPSNILLDENFNAKISDFGLARLLSKLDKHVMSNRFQSALGYVAPELACQSLRVNEKCDVYGFGASTNDIYYTNMFQLLKP* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g0480 238 ProSiteProfiles Protein kinase domain profile. 27 238 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr7g0480 238 PIRSF ILK 6 227 - -
Mtr7g0480 238 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 12 221 - -
Mtr7g0480 238 Gene3D Transferase(Phosphotransferase) domain 1 6 230 - -
Mtr7g0480 238 PANTHER RECEPTOR PROTEIN KINASE 12 221 - -
Mtr7g0480 238 Pfam Protein kinase domain 29 223 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr7g0480 238 SUPERFAMILY Protein kinase-like (PK-like) 15 222 IPR011009 -
Mtr7g0480 238 ProSitePatterns Protein kinases ATP-binding region signature. 33 58 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g0480 Mtr-Chr7 7457480 7462281 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g0480 22 222 Receptor kinase-like Gene Family AT3G28040 72.277 9.01e-99 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Mtr7g0480 Pkinase 9.3e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g0480 - - mtr:MTR_7g022050 410.223