Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g0449 ATGACCATGGTTCCTTCTCAAAGTAGCAAACAAAATTACAAAACTATAAATGGTGATTATGTTTTCTACAACAACAACTCAACAAGTGCTATGAACCAATTTCAATTTGTTGAAGACTATAGCACCTACAATAATTGTTTAAGATCTGAATTTTTTGTGAGGCCAATGGCTGAAGAAGAGGAATCATCATCAAGACTCAACACTATCACCACCACTACTCATCACAACGAACTTGAACCCGAACCCGAAGGAGAAACCATTTCAACCTCAAAGGAAGAAGAAGAACAAGAACAAGAAAGAGAAGCAAACAACAATAACATCAATAACAACAACAACAACAATAACTGGCTTCAATTAAGCATAGGTAATACGGCCGTGACCACAACCACGAAACATGGTCGTGATCATAACCAGACTCCAACAAGCAGTTCAGGCTTGCTGGAGCTTGAGTTGTTACCAACAAATTGGGCTGCTTCGCGGCCCAATTTGGAGCAACCATCGACCAGAGGTTGCTCAAATTTTAATTCTTCTTTGTTTTTTGAACAAACGACATCTTCCTCATCTTCTTCGTCCTTGTCCATATCTATGTCAATGCCAAGTGGTCCAACCTATGGTCATCAACAACAACATCAACATCTAGTACCACATAACTGGGCATTTGGTCCATTATTACCACACTCAATGGCAATTAATATGCCTTCTTCTACATCTTATATTCCATCTTCTTCTTTATCACAATCTTGTTCTTCTTTAAGGCCATCTTTAGGACCTAATTATTATCCTCAATATCATCATGCATCACCCTTTCACTTTCCTTCATCTTCTTCATCTTCTGGATTTGATCAATTTGATGTGGCCGGTCCTAGCTCATCATCTAACGTCGCTTTTCGAGTTGTCGATCCTCCTCGTAGACCTCATTCTGGAATTTGGTTTATGCTACAAGCCTCACAAAATCAATTGAAAGAACCATTCTTGCCACAAATACCTAAGAACTATCTTAGAATTAAAGATGGAAGGATGACAGTTCGGTTGCTATTCAAGTATTTGGTTAGCAAACTCAAACTTGAGAGTGAATCAGAGATAGAGATAACATGCAGAGGACAACAACTTTTACCTTTCTTAACGTTGCAGCATGTGAGAGATAATATTTGGACACCAAGGGACACCACAACAAGACCTTTGCTTTCAGATTCCTCAACAACAGATCATGTAATGGTGCTTCATTATGGTAGAAGCACTTCTTGA 1245 0.388 MTMVPSQSSKQNYKTINGDYVFYNNNSTSAMNQFQFVEDYSTYNNCLRSEFFVRPMAEEEESSSRLNTITTTTHHNELEPEPEGETISTSKEEEEQEQEREANNNNINNNNNNNNWLQLSIGNTAVTTTTKHGRDHNQTPTSSSGLLELELLPTNWAASRPNLEQPSTRGCSNFNSSLFFEQTTSSSSSSSLSISMSMPSGPTYGHQQQHQHLVPHNWAFGPLLPHSMAINMPSSTSYIPSSSLSQSCSSLRPSLGPNYYPQYHHASPFHFPSSSSSSGFDQFDVAGPSSSSNVAFRVVDPPRRPHSGIWFMLQASQNQLKEPFLPQIPKNYLRIKDGRMTVRLLFKYLVSKLKLESESEIEITCRGQQLLPFLTLQHVRDNIWTPRDTTTRPLLSDSSTTDHVMVLHYGRSTS* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g0449 414 Coils Coil 90 113 - -
Mtr7g0449 414 MobiDBLite consensus disorder prediction 102 117 - -
Mtr7g0449 414 Gene3D - 303 409 - -
Mtr7g0449 414 PANTHER RING FINGER PROTEIN 1 412 IPR044171 GO:0007275
Mtr7g0449 414 PANTHER RING FINGER PROTEIN 1 412 - -
Mtr7g0449 414 MobiDBLite consensus disorder prediction 190 210 - -
Mtr7g0449 414 MobiDBLite consensus disorder prediction 76 101 - -
Mtr7g0449 414 MobiDBLite consensus disorder prediction 57 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g0449 Mtr-Chr7 7127522 7139224 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g0449 322 409 C3H Transcription Factor Family AT3G23060 39.130 1.25e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g0449 - - mtr:MTR_7g021270 605.134