Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g0446 ATGTCTTTTCTACTTTGTTGTTCTATTGCAATGTGTGTTGCTGCAATTATACTTCACCAATGTTCCTTTGCAGTTTCACACCCTAATAAGATCACAAATTTACCTGGTCAACCACATGTTGATTTTCATCAGTTTTCAGGTTATGTAAATGTTGATGATCAAAACAAAAAAGCACTCTTTTTCTACTTTGTTGAGGCTAAGAATGATGCTGTTTCCAAACCACTTGTTCTTTGGCTCAATGGAGGACCTGGTTGTTCTTCTCTTGGTGTTGGTGCATTTTCAGAAAATGGGCCATTTAGGCCTAAAGGAGAGGCTTTGGTTAAGAACCAATTCAGCTGGAACACAGAGGCAAATATGTTGTACTTGGAATCACCAATTGGAGTAGGATTTTCTTATTCAACTGATACTTCATCTTATGAAGGTGTAAATGACAAGATTACAGCCAGGGATAATTTAATCTTCTTGCAAAACTGGTTTGTGAAGTTCCCTGAATACAGAAACAGAAGTTTGTTCATCGTAGGAGAGAGCTATGCCGGTCATTATGTTCCTCAATTGGCTGAGCTTATGCTCCAATTCAACAAAAAGGAGAAGTTGTTTAATTTAAAAGGCATTGCTCTTGGTAATCCAGTTTTAGAATTTGCAACAGATTTTAATTCAAGAGCTGAGTTCTTTTGGTCTCATGGATTGATCTCAGACTTAACATTTAAAATGTTCACTTCAGTTTGTAACTATTCAAGATATGTGAGAGAATACTATAACGGCGCCGTTTCTCCCGTTTGTTCAAGTGTAATGAGCCAAGTTAGTACAGAAACAAGCAGATTTGTTGACAAGTATGATGTCACTCTTGATGTTTGTATATCTTCTGTGTTTTCGCAAACCAATGTCCTCAATCCTCAGCAAGTGACCGAAACCATTGATGTATGCGTTGAAGATGAAACCGTCAATTATCTTAACAGGAAAGATGTTCAATCAGCTTTACATGCACATCTGATTGGAGTACATAGATGGTCTCCCTGCAGCAGTGTCTTGGATTATGAGTTGCGTGACTTGGAGATACCGACAATCACAGTTGTAGGCAAGCTAGTCAAGGCAGGAATTCCAGTTTTGGTCTACAGTGGTGATCAGGATTCAGTTATCCCATTGACCGGAAGTAGAACTTTAGTACATCAATTGGCAAAACAGCTGAGAATGAATACCACTGTGCCATACAGGGTGTGGTTTGCAGGGCAACAGGTTGGTGGTTGGACTCAAGTTTATGGTAACATACTATCATTTGCAACAGTTAGGGGAGCATCACATGAAGTACCCTTTTCACAGCCTGAGAGATCACTTGTGCTGTTTAAGTCCTTCCTAGAAGGAAGACCTCTACCAGAAGAATTTTGA 1383 0.3919 MSFLLCCSIAMCVAAIILHQCSFAVSHPNKITNLPGQPHVDFHQFSGYVNVDDQNKKALFFYFVEAKNDAVSKPLVLWLNGGPGCSSLGVGAFSENGPFRPKGEALVKNQFSWNTEANMLYLESPIGVGFSYSTDTSSYEGVNDKITARDNLIFLQNWFVKFPEYRNRSLFIVGESYAGHYVPQLAELMLQFNKKEKLFNLKGIALGNPVLEFATDFNSRAEFFWSHGLISDLTFKMFTSVCNYSRYVREYYNGAVSPVCSSVMSQVSTETSRFVDKYDVTLDVCISSVFSQTNVLNPQQVTETIDVCVEDETVNYLNRKDVQSALHAHLIGVHRWSPCSSVLDYELRDLEIPTITVVGKLVKAGIPVLVYSGDQDSVIPLTGSRTLVHQLAKQLRMNTTVPYRVWFAGQQVGGWTQVYGNILSFATVRGASHEVPFSQPERSLVLFKSFLEGRPLPEEF* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g0446 460 ProSitePatterns Serine carboxypeptidases, serine active site. 172 179 IPR018202 GO:0004185
Mtr7g0446 460 Gene3D - 308 344 - -
Mtr7g0446 460 PANTHER CARBOXYPEPTIDASE 6 458 - -
Mtr7g0446 460 ProSitePatterns Serine carboxypeptidases, histidine active site. 423 440 IPR033124 GO:0004185
Mtr7g0446 460 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 6 458 IPR001563 GO:0004185|GO:0006508
Mtr7g0446 460 Pfam Serine carboxypeptidase 36 453 IPR001563 GO:0004185|GO:0006508
Mtr7g0446 460 SUPERFAMILY alpha/beta-Hydrolases 31 457 IPR029058 -
Mtr7g0446 460 Gene3D alpha/beta hydrolase 26 287 IPR029058 -
Mtr7g0446 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 109 121 IPR001563 GO:0004185|GO:0006508
Mtr7g0446 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 122 132 IPR001563 GO:0004185|GO:0006508
Mtr7g0446 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 158 183 IPR001563 GO:0004185|GO:0006508
Mtr7g0446 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 423 436 IPR001563 GO:0004185|GO:0006508
Mtr7g0446 460 Gene3D - 355 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g0446 Mtr-Chr7 7062151 7067194 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g0446 316 456 Calmodulin-binding Proteins AT2G22960 26.241 2.05e-13 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g0446 K16297 - gmx:100805130 823.928