Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g0439 ATGGTTTCTGCTCTCTCTCAAGTCATTGGAACATCATCTACCAATCATAATAACCCACAAATGGCACAATCAATCTCAACTACTATGGTCAATGAAGAATCTCAACCACCTCAACCTCTTCTAGATCAAGAGACCAAAAAGAAACCACACTATAGAGGAGTGAGACAGAGACCATGGGGAAAATGGGCAGCTGAAATACGTGACCCAAAAAAAGCAGCTAGAGTTTGGTTAGGAACATTTGATACAGCTGAAGATGCAGCTCTTGCATATGACAAAGCTGCACTCAAATTCAAAGGCACAAAAGCTAAGCTTAATTTCCCTGAAAGAGTTGTTCAATGCAACAGTTATAGTTCTACTGCTAATAATGCAATTCAACAAAGTGATTATGTTTCTAATTCTCATGATCAACAAGTTTTCCCAAACTTGTTTCAGTATGCTCAGATTCTAGAAAGTGATGCTGAATTCCCTTATTATGCTTCTCATCTTTTCAATCAACAACAACAAGGAGATCGTCACCCACCGGGCGAGTAG 531 0.3917 MVSALSQVIGTSSTNHNNPQMAQSISTTMVNEESQPPQPLLDQETKKKPHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEDAALAYDKAALKFKGTKAKLNFPERVVQCNSYSSTANNAIQQSDYVSNSHDQQVFPNLFQYAQILESDAEFPYYASHLFNQQQQGDRHPPGE* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g0439 176 MobiDBLite consensus disorder prediction 1 20 - -
Mtr7g0439 176 MobiDBLite consensus disorder prediction 27 41 - -
Mtr7g0439 176 Gene3D AP2/ERF domain 50 109 IPR036955 GO:0003700|GO:0006355
Mtr7g0439 176 PANTHER DNA-BINDING DOMAIN 15 151 IPR044808 GO:0003700|GO:0009873
Mtr7g0439 176 Pfam AP2 domain 49 99 IPR001471 GO:0003700|GO:0006355
Mtr7g0439 176 ProSiteProfiles AP2/ERF domain profile. 50 107 IPR001471 GO:0003700|GO:0006355
Mtr7g0439 176 MobiDBLite consensus disorder prediction 27 55 - -
Mtr7g0439 176 CDD AP2 49 108 IPR001471 GO:0003700|GO:0006355
Mtr7g0439 176 SUPERFAMILY DNA-binding domain 50 108 IPR016177 GO:0003677
Mtr7g0439 176 PRINTS Ethylene responsive element binding protein signature 51 62 IPR001471 GO:0003700|GO:0006355
Mtr7g0439 176 PRINTS Ethylene responsive element binding protein signature 73 89 IPR001471 GO:0003700|GO:0006355
Mtr7g0439 176 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF110 15 151 - -
Mtr7g0439 176 SMART rav1_2 50 113 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g0439 Mtr-Chr7 6999001 7002080 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g0439 1 163 AP2-EREBP Transcription Factor Family AT5G13330 50.838 5.99e-46 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mtr7g0439 AP2 5.9e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g0439 - - mtr:MTR_7g020980 353.984