Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g0436 ATGCAATTCGCTAAGCTTGATGATTCTCCTATGTTCCGCAAACAGATACAGGGCATGGAGGAAAGTGCCGAATCTTTGAGAGAGAGAAGTTTGAAATTTTACAAGGGATGCAGAAAATACACGGAAGGACTTGGAGAGGCATATGATGGAGACATTGCATTTGCAAGTGCCCTAGAAACTTTTGGTGGGGGCCATAATGACCCCATCAGTGTAGCTTTTGGAGGCCCTGTTATGACCAAATTCACTATAGCCTTGAGAGAAATCGGGACATACAAGGAAGTCCTTCGATCACAGGTTGAGCATATGTTAAATGACAGATTGCTCCAGTTTGTCAATATTGATTTGCAAGAGGTCAAGGAAGCACGAAAACGCTTTGACAAAGCCAGCCTTATCTATGACCAGACTCGTGAAAAGTTTCTTTCACTGAGAAAAGGTACAAAAAGTGATGTAGCTACTGCCCTAGAAGAGGAGCTTCATAGTGCAAGAACTACATTTGAGCAAACTCGATTTAATCTGGTTACTGCTCTCTCAAATGTTGAAGCAAAGAAGAGATTTGAGTTTTTGGAAGCAGTCAGTGGGACCATGGATGCACATCTTCGTTACTTCAAACAGGGGTATGAACTATTACATCAAATGGAGCCGTACATTAACCAGGTCTTGACTTATGCTCAGCAATCAAGAGAAAGGTCCAATTATGAGCAAGCAGCTCTCAATGAAAGAATGCAAGATTACAAACGGCAGATTGATCGAGAAAGTAGGTGGGCTTCTAATGGTTCTAATGGATCTCCTAATGGAGATGGTATACAAGCCATTGGTAGAAGTTCACATAAGATGATAGAAGCAGTAATGCAAAATGCTGCAAAGGGAAAGGTTCAGACTATTCGACAAGGTTATCTCTCCAAGCGTTCCTCAAACTTAAGGGGGGACTGGAAAAGGAGATTTTTCGTTCTTGATAGCCGGGGAATGCTGTATTACTACCGTAAACAATGCAGCAAACCATCTGGCTCTAGCAGTCAACATTCTGGTCAGAGGAATAGTTCGGAGCTTGGTTCTGGGCTTCTAAGTCGATGGCTGTCCTCTCATCATCATCATCATGGTGGAGTACATGATGAGAAATCCGTTGCTCATCACACTGTGAACCTGCTTACATCAACAATCAAAGTTGATGCTGACCAATCAGATTTGAGGTTTTGCTTCCGCATCATTTCACCAACAAAGAACTACACTTTGCAGGCAGAGAGTGCGCTGGACCAAATGGATTGGATTGAAAAAATCACAGGTGTTATTGCCTCATTGCTGAGTTCTCAGATTCCTGAAAGGTTGTTGCCGGCAAGTCCAATGGGAAGTGGTCATCTCAGGTCTACCAGTGAGAGTAGTTCTTTTGAAAGTTCAGATTTTGATCACTGTGCTGTTGAAGAAAGTGCAGCTGATAGATGTTTTGTGTCTTCACATCTGGAGCGTGCATCCAGAAATTTGAACCAGCAGCGGTCCTGTAATAAAAGTGAAAAACCAATTGAAGTGTTGCGAAGAGTTATCGGGAATGATAAATGTGCTGATTGTGGGGCACCTGAACCGGATTGGGCATCACTAAATCTTGGCGTTCTTGTTTGCATTGAATGTTCCGGTGTTCATCGAAACCTTGGTGTGCACATATCAAAGGTTCGCTCTCTTACATTGGACGTTAAGGTGTGGGAACCTTCTGTGATAACTTTATTTCAGTCTCTTGGGAATACTTTTGCCAACTCTGTCTGGGAGGAACTTTTGCAATCAAGAAGTGCCTTTCAGGTTGATCTTGTCCCTACAGGCTCGAGCAAGTCCGATAAGCCACAAACAGTTTTCATCACCAAACCTGGTCAATATGATTCTCTAGCAGTGAAGGAAAAGTTCATCCAGGCAAAGTATGCAGAGAAGATTTTTGTTCGCAAGCCGAAGGACAATCAGTACCGACTCTTAGTAGCACAACAGATCTGGGAGGCTGTTCGTGCTAATGATAAGAAAGCCGTATACCGCTACATTGTTAATTCGGATGTTGATGTCAACGTTGTTTATGAGCAAGCATGCAACAACTCTTTAACCCTTGCCAAAGTAATGCTATTACAAGAGCAGGCAAACAATGATAACAGCCCTAATTTGGCAGGGAACACATTGGACTGGTCCTCTAATTGCTCTATGAATTTGGTAGGCAGTAAAGAAGGCCAGCCGATGCTCAATCTCGAAGGGTGCACACTACTTCACATTGCTTGTGAAACTGCAGACATTGGAATGGTGGAGCTCCTCCTGCAATATGGCGCAAATATTAATGCAACTGATATGAGAGGCCGAACTCCTTTACATCGTTGTATTCTCAAAGGAAGATCTATAATTGCAAGATTACTGCTTTCAAGGGGAGGCGATCCTCGAGCCGTGGATGAGGATGGAAGAACTCCTATTGAGCTTGCTGCAGAATCAAATGCTGATGACAGAGTAGTCCATGCTCCATCAAATGATTCTAATGGATGA 2499 0.4314 MQFAKLDDSPMFRKQIQGMEESAESLRERSLKFYKGCRKYTEGLGEAYDGDIAFASALETFGGGHNDPISVAFGGPVMTKFTIALREIGTYKEVLRSQVEHMLNDRLLQFVNIDLQEVKEARKRFDKASLIYDQTREKFLSLRKGTKSDVATALEEELHSARTTFEQTRFNLVTALSNVEAKKRFEFLEAVSGTMDAHLRYFKQGYELLHQMEPYINQVLTYAQQSRERSNYEQAALNERMQDYKRQIDRESRWASNGSNGSPNGDGIQAIGRSSHKMIEAVMQNAAKGKVQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKPSGSSSQHSGQRNSSELGSGLLSRWLSSHHHHHGGVHDEKSVAHHTVNLLTSTIKVDADQSDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGVIASLLSSQIPERLLPASPMGSGHLRSTSESSSFESSDFDHCAVEESAADRCFVSSHLERASRNLNQQRSCNKSEKPIEVLRRVIGNDKCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNTFANSVWEELLQSRSAFQVDLVPTGSSKSDKPQTVFITKPGQYDSLAVKEKFIQAKYAEKIFVRKPKDNQYRLLVAQQIWEAVRANDKKAVYRYIVNSDVDVNVVYEQACNNSLTLAKVMLLQEQANNDNSPNLAGNTLDWSSNCSMNLVGSKEGQPMLNLEGCTLLHIACETADIGMVELLLQYGANINATDMRGRTPLHRCILKGRSIIARLLLSRGGDPRAVDEDGRTPIELAAESNADDRVVHAPSNDSNG* 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g0436 832 MobiDBLite consensus disorder prediction 249 270 - -
Mtr7g0436 832 SUPERFAMILY Ankyrin repeat 665 820 IPR036770 -
Mtr7g0436 832 ProSiteProfiles Ankyrin repeat region circular profile. 772 804 - -
Mtr7g0436 832 ProSiteProfiles Ankyrin repeat profile. 739 771 IPR002110 GO:0005515
Mtr7g0436 832 MobiDBLite consensus disorder prediction 811 832 - -
Mtr7g0436 832 SUPERFAMILY PH domain-like 293 446 - -
Mtr7g0436 832 Gene3D Arf GTPase activating protein 482 646 IPR038508 -
Mtr7g0436 832 SMART ANK_2a 772 801 IPR002110 GO:0005515
Mtr7g0436 832 SMART ANK_2a 739 768 IPR002110 GO:0005515
Mtr7g0436 832 SMART arf_gap_3 502 647 IPR001164 GO:0005096
Mtr7g0436 832 PRINTS HIV Rev interacting protein signature 514 533 IPR001164 GO:0005096
Mtr7g0436 832 PRINTS HIV Rev interacting protein signature 533 550 IPR001164 GO:0005096
Mtr7g0436 832 PRINTS HIV Rev interacting protein signature 556 577 IPR001164 GO:0005096
Mtr7g0436 832 ProSiteProfiles PH domain profile. 292 430 IPR001849 -
Mtr7g0436 832 SUPERFAMILY ArfGap/RecO-like zinc finger 502 642 IPR037278 -
Mtr7g0436 832 MobiDBLite consensus disorder prediction 253 269 - -
Mtr7g0436 832 Gene3D - 647 824 IPR036770 -
Mtr7g0436 832 Pfam Putative GTPase activating protein for Arf 505 642 IPR001164 GO:0005096
Mtr7g0436 832 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD1 1 822 - -
Mtr7g0436 832 Coils Coil 227 247 - -
Mtr7g0436 832 PANTHER CENTAURIN/ARF 1 822 IPR045258 GO:0005096
Mtr7g0436 832 Pfam Ankyrin repeats (many copies) 742 793 IPR002110 GO:0005515
Mtr7g0436 832 Gene3D - 285 439 IPR011993 -
Mtr7g0436 832 SUPERFAMILY BAR/IMD domain-like 6 315 IPR027267 -
Mtr7g0436 832 SMART PH_update 293 432 IPR001849 -
Mtr7g0436 832 ProSiteProfiles ARF GTPase-activating proteins domain profile. 502 647 IPR001164 GO:0005096
Mtr7g0436 832 ProSiteProfiles Ankyrin repeat region circular profile. 739 770 - -
Mtr7g0436 832 CDD ArfGap 505 634 - -
Mtr7g0436 832 ProSiteProfiles Ankyrin repeat profile. 772 804 IPR002110 GO:0005515
Mtr7g0436 832 Pfam PH domain 294 429 IPR001849 -
Mtr7g0436 832 Gene3D Arfaptin homology (AH) domain/BAR domain 4 250 IPR027267 -
Mtr7g0436 832 CDD BAR_SFC_plant 14 215 IPR035670 -
Mtr7g0436 832 CDD PH_ACAP 295 434 - -
Mtr7g0436 832 SMART 5bar 11 218 IPR004148 GO:0005515|GO:0005737
Mtr7g0436 832 Pfam BAR domain of APPL family 6 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g0436 Mtr-Chr7 6940808 6951746 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g0436 514 641 C2H2 Transcription Factor Family AT4G21160 42.636 1.61e-21 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g0436 K12489 - gmx:100789134 1427.92