Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g0405 ATGGACGCGCGTCGACCACCACGCGCCGTCATTGACCCGAAAGTTCGCACAGTCGGATTCTTCACTCCACCCGACCCGATTCAATTCGACTCCAATTCCCTCTCTCCCGTCATGATCCCTCCGCCGTGTCATTCCTCGGAAAATCTCGACCTCCATTCTCCTCCCTCCGTTACTCCCCCTTCGGGCGATGAATCCGTTTCTGTGACCGGAAGCTATAACGGAAGCTCGTCGGAATTATTTCCTGCTCCGATGTCGCCGGCTCTGTCTCAGAAGATCGTCGCCGGAGATGGTGGAGTTGGTGGTGGAATTGTGGCGTCGTCTTTTCCGCGTGGTGGTGGTGTTCCGGTGTGTAAATTGACCACGGTTTCTGTGGTCAATACTGATTCATTTGCTTTTGATGAAAGAGATAAACCAAACAAAGGAGGAGGGTCCTCAATGGAAGTGAAAGACCAAGCTATGAATTCAAAACAGAAGAATGAGAAGTCCTCAAAAGCTGAAAGACGTGCTCTCCAAGAAGCTCAGCGAGCTGCAAAGGCTGCTGCAAAAGCTGAAGGAAACAAGGCAACTGGAACTGTGACTTCAGGGAATTTAAAATCAGCTAAAGCTACAAAGCCCCCACAAAAAGTTGATAATACTTCAGTTGCAGCTTCCGAGAAGAAGGGAGTTGATCGTCCGTCAGAGAAGGATAGGAAGAAAGATGTTCCTCACCCACGCATGCAATATGATGATAAGAGCAGAGTGGAGAAAGCTAAACGCCGTGCTGTGGTAAACCACACTGAATCCAGGAACAGAGTTGAACTATTCAGACATTTGCCACAGTATGAACATGGGAGTCAGCTTCCTGATCTTGAAGCGAAGTTTTTCCAGCTTGAACCTGTGCATCCTTCAGTTTATAAGGTGGGTTTGCAGTATCTTTCTGGAGATATATCCGGTGGCAATGCTCGTTGTATTGCTATGCTTCAGGCATTCCAGGATGCCATCAAAGACTACACCGTTCCACCCGAGAAGACTCTAGTTAGAGACCTGACAGCAAAAATAAGTAGCTATGTTTCATTCCTTATTGAGTGTCGGCCTCTTTCAATCAGTATGGGAAATGCAATTAGATTTCTCAAAAGTCAAATTGCAAAGCTACCTCTGACACTGTCTGAGTCAGAATCAAAAACTTCTCTTCAATCAGATATTGAGCGTTTCATATATGAGAAGATTATACTTGCTGACAAGGTGATAGTAGAGCATGCTGTCACAAAAATAAGAGATGGTGATGTTCTTCTTACTTATGGGTCGTCATCAGCGGTTGAAATGATACTGTTACGTGCACATGAGTTAGGGAAACAGTTTCAAGTTGTAGTAGTAGACTCTCGGCCAAGTCTTAAAGGGAAACTTTTGCTCCGTAGACTAGTGGAGAAAGGTCTTACTTGTACATACACTCATATAAATGCTGTTTCCTTCATAATGCATGAAGTTACTCGTGTTTTTCTGGGCGCTTCATCAGTGCTGTCTAATGGAACAGTTTATTCAGGAGTTGGGACTGCATCTGTTGCAATGGTTGCTCATGCATTCCATGTCCCTGTTATAGTTTGTTGTGAGGCTTTTAAATTTCATGAAAGGGTTCAGCTTGATTCAATATGCTCAAATGAACTTGGTGACCCAGATGTTATTTCAAAGGTTTCGGGTAGAGGGGATGTTAACCACTTAGATGCTTGGGCCAATGCTGAAAATCTGCAACTTCTGAATCTGATCTATGATGCAACACCTTCAGATTATGTTTCAATCATTGTCACAGATTATGGCATGATTCCCCCTACAAGTGTTCCTGTTGTTGTAAGGGAGTATAGCAGAGAACAGGTGTGGATATAA 1857 0.4448 MDARRPPRAVIDPKVRTVGFFTPPDPIQFDSNSLSPVMIPPPCHSSENLDLHSPPSVTPPSGDESVSVTGSYNGSSSELFPAPMSPALSQKIVAGDGGVGGGIVASSFPRGGGVPVCKLTTVSVVNTDSFAFDERDKPNKGGGSSMEVKDQAMNSKQKNEKSSKAERRALQEAQRAAKAAAKAEGNKATGTVTSGNLKSAKATKPPQKVDNTSVAASEKKGVDRPSEKDRKKDVPHPRMQYDDKSRVEKAKRRAVVNHTESRNRVELFRHLPQYEHGSQLPDLEAKFFQLEPVHPSVYKVGLQYLSGDISGGNARCIAMLQAFQDAIKDYTVPPEKTLVRDLTAKISSYVSFLIECRPLSISMGNAIRFLKSQIAKLPLTLSESESKTSLQSDIERFIYEKIILADKVIVEHAVTKIRDGDVLLTYGSSSAVEMILLRAHELGKQFQVVVVDSRPSLKGKLLLRRLVEKGLTCTYTHINAVSFIMHEVTRVFLGASSVLSNGTVYSGVGTASVAMVAHAFHVPVIVCCEAFKFHERVQLDSICSNELGDPDVISKVSGRGDVNHLDAWANAENLQLLNLIYDATPSDYVSIIVTDYGMIPPTSVPVVVREYSREQVWI* 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g0405 618 MobiDBLite consensus disorder prediction 220 254 - -
Mtr7g0405 618 MobiDBLite consensus disorder prediction 153 173 - -
Mtr7g0405 618 Gene3D - 405 611 IPR042529 -
Mtr7g0405 618 MobiDBLite consensus disorder prediction 187 214 - -
Mtr7g0405 618 SUPERFAMILY NagB/RpiA/CoA transferase-like 266 611 IPR037171 -
Mtr7g0405 618 Pfam Initiation factor 2 subunit family 309 601 IPR000649 GO:0044237
Mtr7g0405 618 MobiDBLite consensus disorder prediction 128 254 - -
Mtr7g0405 618 MobiDBLite consensus disorder prediction 32 77 - -
Mtr7g0405 618 PANTHER TRANSLATION INITIATION FACTOR EIF-2B DELTA SUBUNIT 3 618 - -
Mtr7g0405 618 MobiDBLite consensus disorder prediction 49 77 - -
Mtr7g0405 618 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 3 618 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g0405 Mtr-Chr7 6439630 6446267 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g0405 1 618 Eukaryotic Initiation Factors Gene Family AT5G38640 61.353 0.0 751
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g0405 K03680 - gmx:100785938 931.784