Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g0404 ATGTTTCCTTCAACTTATTGCTCTTTAGGTCCTTACCCTTGTTATAATCCTAATTCATCTTCTTCTTCACACTCATACCCTCCTTTTACTTTTCTTACCCCTGATCAAAATGCTTCTTCTAATACCAACAACAACAATAACAACAACAACACCAACAACATCAACAACTTTCTTCATGATCCTACTATTTCTGTTCCCTACACACAAACAACTCATAATCATGTTCCAATTAATCCTGATACACTAACAAATTGGGCTGTTGCTGACTATGCAGCTATGTTGAAACAAGATCTAAGTGGTTCTTCTCATTATAATCTCTCAAATTTGCTCACAAAGAAACCGGTGAAGAAACCGGCTAAGAAAGACAGGCATAGCAAGATTCACACATCTCAAGGGTTGAGAGACAGAAGGGTGAGACTTTCCATCGAGATCGCGAGGAAGTTCTTCGATCTTCAAGACATGTTAGGGTTTGACAAAGCAAGCAACACACTTGAATGGCTCTTCAATAAATCAAAAGAAGCAATTGAAGAGTTAACTAGAAGCAAGAACAACATAGCTTCTGGCGATGACGACGATGGTGATCATAGCTTCTCTTCTTCGTCTTCTGATGAAGGAGACGAAGAAGATTATACTAAAGATAGAAAGATGAAAAGGGCACAGAAAGAATCTTCGAAGACGAAGGATTCTAGGGAGAAAGCAAGAGCAAGAGCTAGGGAAAGAGCAAGTGAGATGAAGATGCAAGAAGATTTGAAAGAAAAATATCCTGAAATTGATCAAAATCAACAAATCCTTCATCAATTGATGCCTAATGAAGATGAAACTTCAAAATCACTTCAAAGAGATGATATCTTTAACTTCATTGAGGAATCTATTGTGATTAAGAGAAAGTTGAAGAAATCTTCTTCTCATCATTATCAACAAAACACTAATTTGATCCCTAAGGAAGCTAGTTTTGATCATGACTCTCCAATGTTATCACCAAATTGGGATGCTAATAATAATAACAATGATGCTGCCACTGGAAGATCCAACTTTTCTGCAATATCAAGAATGAATCTATCATCAGGGCTTCAAATCTTTGGAAAATCATGGGAGGATTGCAATACCAGTCCAAATCGATATTAG 1125 0.368 MFPSTYCSLGPYPCYNPNSSSSSHSYPPFTFLTPDQNASSNTNNNNNNNNTNNINNFLHDPTISVPYTQTTHNHVPINPDTLTNWAVADYAAMLKQDLSGSSHYNLSNLLTKKPVKKPAKKDRHSKIHTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLEWLFNKSKEAIEELTRSKNNIASGDDDDGDHSFSSSSSDEGDEEDYTKDRKMKRAQKESSKTKDSREKARARARERASEMKMQEDLKEKYPEIDQNQQILHQLMPNEDETSKSLQRDDIFNFIEESIVIKRKLKKSSSHHYQQNTNLIPKEASFDHDSPMLSPNWDANNNNNDAATGRSNFSAISRMNLSSGLQIFGKSWEDCNTSPNRY* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g0404 374 MobiDBLite consensus disorder prediction 183 246 - -
Mtr7g0404 374 Pfam TCP family transcription factor 119 246 IPR017887 -
Mtr7g0404 374 Coils Coil 216 236 - -
Mtr7g0404 374 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 24 374 IPR005333 GO:0003700
Mtr7g0404 374 ProSiteProfiles TCP domain profile. 120 178 IPR017887 -
Mtr7g0404 374 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 24 374 - -
Mtr7g0404 374 ProSiteProfiles R domain profile. 227 244 IPR017888 -
Mtr7g0404 374 MobiDBLite consensus disorder prediction 26 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g0404 Mtr-Chr7 6412523 6414431 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g0404 113 312 TCP Transcription Factor Family AT1G67260 41.228 4.17e-35 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Mtr7g0404 TCP 7.5e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g0404 - - cam:101489716 397.512