Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g0400 ATGGGTAAGAAAAAGTCAGAGGATGCAGGACCATCTACAAAGACTAAACCAGGAAGCAAAGATGTTTCTAAGAAGGAAAAATTTTCTGTCTCTGCCATGTTGGCAGGCATGGATGAAAAAGCTGACAAGCCTAAAAAGGCATCCTCGAATAAGGCGAAGCCAAAACCTGCTCCGAAAGCTTCTGCATACACTGATGACATTGATCTTCCTCCCTCTGATGATGATGAGTCTGAAGAAGAGCTAGAGGAAAAGCATAGGCCTGATTTGAAGCCACTTGAGGTGTCTATTGCTGAAAAAGAGTTGAAAAAGCGTGAAAAGAAAGATATTTTAGCTGCCCATGTGGCTGAACAGGCAAAGAAAGAAGCTCTTCGGGATGATCGTGATGCTTTCACCGTTGTCATTGGAAGTCGGGCTTCAGTGCTTGATGGAGACGATGGTGCTGATGCTAATGTCAAAGATATAACAATAGAAAATTTTTCTGTGTCTGCTCGGGGTAAAGAACTTCTGAAGAATACTTCTGTAAAGATATCTCATGGAAAACGGTATGGTTTGATTGGGCCGAATGGAATGGGCAAGTCAACACTATTGAAGCTTCTTGCTTGGAGGAAGATACCGGTGCCTAAGAATATTGATGTCCTTCTGGTTGAGCAGGAGGTAGTTGGCGATGATAAAACAGCGCTTGAAGCTGTTGTTTCAGCTAATGTTGAACTTATTAAAATTCGACAAGAAGTTTCTTATCTACAAAATGCAGCTTCTGGTGAAGAAGGTGTGGATAAAAATGATACTAACGAGGAAGAGGATGCGGGAGAAAAGCTAGCAGAGCTGTATGAACAATTACAACTGATGGGGTCTGATGCTGCTGAATCTCAAGCGTCAAAGATTTTAGCTGGTCTGGGTTTTACAAAGGACATGCAGGGCCGTCCTACAAAATCCTTTAGTGGCGGCTGGAGGATGAGAATTTCTTTAGCTCGAGCACTTTTTGTGCAACCCACTCTATTATTGCTCGATGAACCCACTAATCATCTTGACTTGCGGGCTGTTCTGTGGTTAGAGGAGTATTTGTGTCGTTGGAAAAAAACTTTGGTGGTTGTATCACACGATAGAGATTTTCTCAATACAGTATGCTCTGAGATTATTCATCTGCATGATTTGAAACTTCATTTCTATCGTGGAAATTTTGATGCTTTTGAGAGTGGGTATGAACAGCGTCGTAGAGAAGCGAATAAGAAGTATGAGACTTTTGACAAGCAATTGAAAGCAGCTAGAAGAACCGGGAACAAGGCTCAACAAGATAAGGTGAAGGACAGAGCTAAGTTTGCAGCAGCTAAGGAATCGAAAAGCAAAAGCAAGGGAAAGGGAAAGGTTGATGAGGATGAGACCCAAGTAGAGGTACCACACAAGTGGAGGGACTACAGCGTGGAGTTCCACTTTCCCGAACCTACTGAACTCACACCTCCACTTCTGCAGCTTATTGAAGTGAGCTTCAGTTACCCAAACCGAGAGGATTTTAGACTCTCGGATGTTGATGTTGGCATTGATATGGGGACTCGTGTTGCCATTGTTGGGCCTAATGGTGCTGGAAAATCTACACTGCTGAATCTTCTAGCTGGTGATTTGGTTCCAAGTGAAGGTGAAGTTCGAAGAAGTCAGAAGTTGAGGATAGGGAGATATTCCCAACATTTTGTGGACCTACTAACAATGGATGAAACACCTGTTCAGTACCTTCTTCGTCTCCATCCAGACCAGGAGGGGCTTAGTAAGCAAGAGGCTGTTCGTGCAAAACTTGGTAAATATGGGCTACCTAGTCATAATCATCTTACCCCCATTGTCAAACTATCAGGAGGGCAGAAAGCACGGGTGGTATTCACATCGATATCCATGTCAAGACCTCACATTTTATTGTTAGATGAACCCACAAATCATTTGGATATGCAAAGTATTGATGCATTGGCTGATGCGCTGGATGAATTCACTGGTGGAGTTGTTCTTGTTAGTCATGATTCTAGATTGATATCACGAGTCTGTGATGATGAAGAACGGAGTCAAATATGGGTTGTTGAAGATGGCACTGTCAGAAATTTCCCTGGAACATTTGAGGATTACAAGGATGATCTGCTGAAAGAGATTAAAGCTGAAGTTGATGATTGA 2148 0.4274 MGKKKSEDAGPSTKTKPGSKDVSKKEKFSVSAMLAGMDEKADKPKKASSNKAKPKPAPKASAYTDDIDLPPSDDDESEEELEEKHRPDLKPLEVSIAEKELKKREKKDILAAHVAEQAKKEALRDDRDAFTVVIGSRASVLDGDDGADANVKDITIENFSVSARGKELLKNTSVKISHGKRYGLIGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDKTALEAVVSANVELIKIRQEVSYLQNAASGEEGVDKNDTNEEEDAGEKLAELYEQLQLMGSDAAESQASKILAGLGFTKDMQGRPTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCSEIIHLHDLKLHFYRGNFDAFESGYEQRRREANKKYETFDKQLKAARRTGNKAQQDKVKDRAKFAAAKESKSKSKGKGKVDEDETQVEVPHKWRDYSVEFHFPEPTELTPPLLQLIEVSFSYPNREDFRLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPSEGEVRRSQKLRIGRYSQHFVDLLTMDETPVQYLLRLHPDQEGLSKQEAVRAKLGKYGLPSHNHLTPIVKLSGGQKARVVFTSISMSRPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCDDEERSQIWVVEDGTVRNFPGTFEDYKDDLLKEIKAEVDD* 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g0400 715 MobiDBLite consensus disorder prediction 421 461 - -
Mtr7g0400 715 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 402 IPR027417 -
Mtr7g0400 715 Gene3D - 451 714 IPR027417 -
Mtr7g0400 715 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 154 408 IPR003439 GO:0005524
Mtr7g0400 715 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 488 713 IPR003439 GO:0005524
Mtr7g0400 715 Pfam ABC transporter 169 340 IPR003439 GO:0005524
Mtr7g0400 715 Pfam ABC transporter 505 640 IPR003439 GO:0005524
Mtr7g0400 715 SMART AAA_5 514 690 IPR003593 -
Mtr7g0400 715 SMART AAA_5 178 384 IPR003593 -
Mtr7g0400 715 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 466 701 IPR027417 -
Mtr7g0400 715 CDD ABCF_EF-3 154 385 - -
Mtr7g0400 715 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 5 715 - -
Mtr7g0400 715 Gene3D - 151 435 IPR027417 -
Mtr7g0400 715 ProSitePatterns ABC transporters family signature. 312 326 IPR017871 GO:0005524
Mtr7g0400 715 MobiDBLite consensus disorder prediction 1 90 - -
Mtr7g0400 715 CDD ABCF_EF-3 488 690 - -
Mtr7g0400 715 Coils Coil 404 424 - -
Mtr7g0400 715 PANTHER - 5 715 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g0400 Mtr-Chr7 6319896 6324133 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g0400 488 691 Calmodulin-binding Proteins AT2G36910 26.222 1.28e-11 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g0400 K06184 - gmx:100806865 1142.87