Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g0398 ATGGCTGATCCAAAAGCTATTACCTTAAAACTCTCAATACTACTAATTGTAATGTTTAATGCTAGATACACTATAAGTGCTATTTTTCCAAAGGTAGTTGTTACAATTAAGAATGATATAGCACCAAATCCAACCCCTTTAGATCTCAATGTTCATTGCAAATCAAAAGATGATGATCTTGGATTTCACACAATCAAGTTTAGAGAAATTTACATGTTTTCATTTAGGCCTAATGTGATTCCAGATCTTAATACTTTATATTGGTGCAGCTTTACATGGAAAGGAAGTCCATATCGTCATTATCTTGATATTTATGATGAAAGGTGGGATGATTGCATACATTGCAATTGGAAAATTAACAATACAAATGGTGGTTGTAAGGTTTTGAAGGAAGGACCAAATTTTGATAAATGTATTCATTGGAAAAGCGTTGAATTAATGGATGCAAATAACACATCCAAGATATAA 468 0.3141 MADPKAITLKLSILLIVMFNARYTISAIFPKVVVTIKNDIAPNPTPLDLNVHCKSKDDDLGFHTIKFREIYMFSFRPNVIPDLNTLYWCSFTWKGSPYRHYLDIYDERWDDCIHCNWKINNTNGGCKVLKEGPNFDKCIHWKSVELMDANNTSKI* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g0398 155 PANTHER S-PROTEIN HOMOLOG 18-RELATED 7 141 - -
Mtr7g0398 155 Pfam Plant self-incompatibility protein S1 34 141 IPR010264 -
Mtr7g0398 155 PANTHER - 7 141 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g0398 Mtr-Chr7 6275602 6276069 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g0398 30 146 Carbohydrate Esterase AT3G16970 37.398 3.26e-17 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g0398 - - mtr:MTR_7g018330 337.421