Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g0368 ATGGCTAGGTCTGCTAAAGGCCATCAAGATGAAGAATTGGTCGATGATGATGACGATCAAGACATCTTCACACCAAACACATCTTCCTCTATCAACAACAACAACAATGTGAAGGTGGATGAACCCATCAGAGGGAAAAGGGCTAACCCTCATCGTTCTAAGCATTCAGAAACTGAACAGCGTAGAAGAAGTAAAATTAATGAAAGATTTCAGGCTCTGAGAGATCTCATTCCTGAAAATGATTCAAAAAGAGATAAAGCTTCCTTTTTGTTGGAGGTTATTGAGTATATTCATTTCTTACAGGAAAAGTTACAAATTTATGAACATCCTTATGAAGGATGGAATCAGGAGCCAACTAAATTAATCCCATGGAGAAATCATCACGGACCTTCTGAAAATACTACAGATCCTTCTCGAGCTATTCAAAATGGGTCTGTTGATGGAAAAAATATTGTCTCTCCGTCATTTCCTAAAAATGTACAGAACCCAATATTGTCTGACCCCTCCACAACTATTCCGAAGGGTTGCACCCCTGGTTCATCGACAGAAGTAGTTCCCCTGACCATGCAAATGCGATTGGATATGTTTGATCCGGTTGTTAGCGGTGGTATGGTGACTCAACAGATGCTGGAGTTGCCTGTATCTAATCCTGACATGGCTTCCAATCTCCAGCCTCAAGTATGGCTTGGCAAACCAAACAAGGACAATCATATTGTTTCAGATAATACATTGAAGGAACAAGAGGAGATGAAAATTGATAGCGGATCAGAGTCAGATAGTATCTCAAGTGCCTACTCTCAAAGAATATTGGGTACTCTCACCCAAGCGCTACAATCTTCAGGTGTAGATTTGTCCCAGACCAATGTATCGGTAGATATTGATGTTGGTAGACGAACAAATACTGGATTTACCCCCTGCCAATATAGCTCAAAGAGTAATGAAAATCAATTTGTGAGCAATCAAGCAATAGCATGTTCAGGAATGGATTACTTCAGTGAGGATTCTGAACAAAGTTCAAAGAGGTTCAGAAGAGAAGCAAGCTAG 1044 0.4033 MARSAKGHQDEELVDDDDDQDIFTPNTSSSINNNNNVKVDEPIRGKRANPHRSKHSETEQRRRSKINERFQALRDLIPENDSKRDKASFLLEVIEYIHFLQEKLQIYEHPYEGWNQEPTKLIPWRNHHGPSENTTDPSRAIQNGSVDGKNIVSPSFPKNVQNPILSDPSTTIPKGCTPGSSTEVVPLTMQMRLDMFDPVVSGGMVTQQMLELPVSNPDMASNLQPQVWLGKPNKDNHIVSDNTLKEQEEMKIDSGSESDSISSAYSQRILGTLTQALQSSGVDLSQTNVSVDIDVGRRTNTGFTPCQYSSKSNENQFVSNQAIACSGMDYFSEDSEQSSKRFRREAS* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g0368 347 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 50 100 IPR011598 GO:0046983
Mtr7g0368 347 MobiDBLite consensus disorder prediction 128 156 - -
Mtr7g0368 347 Pfam Helix-loop-helix DNA-binding domain 52 101 IPR011598 GO:0046983
Mtr7g0368 347 Gene3D - 48 121 IPR036638 GO:0046983
Mtr7g0368 347 MobiDBLite consensus disorder prediction 23 39 - -
Mtr7g0368 347 MobiDBLite consensus disorder prediction 1 65 - -
Mtr7g0368 347 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 1 346 IPR044295 GO:0003700|GO:0006351|GO:0046983
Mtr7g0368 347 SMART finulus 56 106 IPR011598 GO:0046983
Mtr7g0368 347 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 50 129 IPR036638 GO:0046983
Mtr7g0368 347 PANTHER TRANSCRIPTION FACTOR BIM3 1 346 - -
Mtr7g0368 347 MobiDBLite consensus disorder prediction 124 156 - -
Mtr7g0368 347 CDD bHLH_AtBIM_like 52 125 - -
Mtr7g0368 347 MobiDBLite consensus disorder prediction 40 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g0368 Mtr-Chr7 5738032 5744434 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g0368 3 311 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G69010 39.875 1.61e-56 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mtr7g0368 HLH 2.7e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g0368 - - mtr:MTR_7g017320 674.855