Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g0366 ATGGATAATACCATAGGCGTGAAAAAAGGTGCATGGACATACGAGGAAGACAACTTACTCAAGGCTTACATTAACAAGTATGGTGAAGGAAAATGGCATTTAATTCCTCAAAGAGCAGGTTCAGGATTGAATAGATGTCGAAAAAGTTGTAGATTGAGGTGGATAAATTATTTAAAGCCCAACATCAATAGAAAAAGCTTTTCTGAGGATGAAGTTGATATGATCCTAAGGTTACACAAACTCTTAGGAAATAGATGGTCATTGATTGCTGGAAGGCTTCCGGGTAGAACAGCTAATAGTGTGAAAAACTATTGGAACACACACTTGTTGAAGAAGGTGGTTTCAAAACAAGAAGAAGAAAAAGAGAAACCAATGGAGACAATGAAAGCTCACCAAGTTATTAAACCTAGACCTATAACTTTTTCAACTCAATCATCTTGGTTGAATGTGAAACACAATAATTTTGTGACACAACCATTATTGGCTTCAAACAATGATGGTTGTTTTCCTAGAGATCGTGATGACAAAATGACTATGGTTGTTCCTAACCAAATTGGTAAAGATTGTGCTTCTTCTTCACAACCAATTCTAGGTAATGTCCCAATACCTTGTACAATGTGGTCAGAAAGTTTATGGAACTTGGGGGAGCAAGTAGATAGTGAGATAATTGGATCGTCCTCTTCATTACAAGTGGAGAACTATGAGGAGTTTTCAATTGTTGATGACTTTTGGGATTTCAACATTTGTGATTATGATTCTCTTTGGGATCTTTAG 774 0.363 MDNTIGVKKGAWTYEEDNLLKAYINKYGEGKWHLIPQRAGSGLNRCRKSCRLRWINYLKPNINRKSFSEDEVDMILRLHKLLGNRWSLIAGRLPGRTANSVKNYWNTHLLKKVVSKQEEEKEKPMETMKAHQVIKPRPITFSTQSSWLNVKHNNFVTQPLLASNNDGCFPRDRDDKMTMVVPNQIGKDCASSSQPILGNVPIPCTMWSESLWNLGEQVDSEIIGSSSSLQVENYEEFSIVDDFWDFNICDYDSLWDL* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g0366 257 ProSiteProfiles Myb-like domain profile. 4 58 IPR001005 -
Mtr7g0366 257 CDD SANT 11 58 IPR001005 -
Mtr7g0366 257 SUPERFAMILY Homeodomain-like 6 105 IPR009057 -
Mtr7g0366 257 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 113 IPR017930 -
Mtr7g0366 257 SMART sant 63 111 IPR001005 -
Mtr7g0366 257 SMART sant 8 60 IPR001005 -
Mtr7g0366 257 ProSiteProfiles Myb-like domain profile. 59 109 IPR001005 -
Mtr7g0366 257 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 4 62 IPR017930 -
Mtr7g0366 257 Gene3D - 66 136 - -
Mtr7g0366 257 Gene3D - 3 64 - -
Mtr7g0366 257 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 6 157 - -
Mtr7g0366 257 Pfam Myb-like DNA-binding domain 9 58 IPR001005 -
Mtr7g0366 257 Pfam Myb-like DNA-binding domain 64 109 IPR001005 -
Mtr7g0366 257 CDD SANT 66 109 IPR001005 -
Mtr7g0366 257 PANTHER TRANSCRIPTION FACTOR MYB113-RELATED 6 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g0366 Mtr-Chr7 5717468 5720674 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g0366 6 166 MYB Transcription Factor Family AT1G66370 52.747 3.44e-57 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mtr7g0366 Myb_DNA-binding 2.1e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g0366 - K16166 mtr:MTR_7g017260 529.25