LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr7g0361	ATGGTGGTTGTTTTGGCTTCATCCACGGATGCTAGTGGTGGGATTGGATGCTGGGACCTTAACACAGGTTCTGAGCAGATCCGCTACAAATCATTTTCTTCCCCTTCTCATGGACTTGTCTCTGTTGGTGATCGTTTCCTTGCATCTTCTCAGCTTCGAGATGCATCAACTTCCTCTGCTTCCGTTTTCTTCTGGTCCTGGTCCAAGCCTCAAGTTGAAGTTAAGAGCTTTCCTTCTGAACCTATCACGCCTCTTGCTTCTAATCACAGTGGCACTTATCTAGTTGGTGGAGGTTTGTCTGGTGAAATATACTTGTGGGAGGTTGAAACCGGCAGATTGCTTAAGAAGTGGCATGGTCATAATACGGCTGTTACTTGCCTGGTATTTTCTGAAGATGACTCACTTCTAATATCTGGTTTTAAAAATGGAAGCGTACGAGTTTGGTCTCTCTTAATGATATTTGATGATGTGAGAAGACGGGAAGCAAGCAAGATTTATGAGTATAGTTTTTCAGACCACACTTTGTGTGTAAATGATGTTGTGATCGGTTATGGAGGATGCAATGCAATTATAGCTTCAGCGTCAGATGATCGGACGTGTAAGGTATGGACCTTATCTAATGGAATGCTACAAAGAAATATAGTGTTCCCTTCAAAAATTAAAGCCATTGCATTGGATCCTGCTGAACATGTTCTCTATGCTGGCAGTGAAGATGGAAAAATATTTGTCGCTGCACTTAACACCACAAGAATCACTACTAATGATCAAGTTTCATATATCACTGGTTCATTTTCTAACCACAGCAAGGCAGTTACTTGCTTAGCATATAGTGCCGCCGAGAATTTTTTAATATCTGGATCTGATGATGGAATTGTTCGAGTTTGGAATGCCAGTACTCATAACATCATCCGTGTCTTTAAACATGCTAAAGGACCAATAACTAATATTCTTGTTCTTAGACAAGAAAATGACTTGAGTAATCCCATGTCCTCTAATTTACAAGGAACCTCAAAAAAGAAGGGAGCTCAATTTCCTCCTCTGGAAAAGTATGCGAATTCAATGGATGAAGACTCAGATAAAACGACTATTGTCAGTCTTGGTGGTGGCAATATATGCATGGATGTTTCATACCTTAGTTCTCAAGTGATTTCTAGTTACAGTAAAGAACTTCAGAGTCAAGGTTCAGCTGCTGCTTCTGAAATGGAGATAGAGAAACTAAAGCGTGATTGCCAAAAGTCGGTACAAATGGTTAACAAATGGAAAAAAATGTATGAAAACTTGCATCAATTTTGTGTAAAGGAGATGCTAGATGGAAATGAGAAATAA	1326	0.3974	MVVVLASSTDASGGIGCWDLNTGSEQIRYKSFSSPSHGLVSVGDRFLASSQLRDASTSSASVFFWSWSKPQVEVKSFPSEPITPLASNHSGTYLVGGGLSGEIYLWEVETGRLLKKWHGHNTAVTCLVFSEDDSLLISGFKNGSVRVWSLLMIFDDVRRREASKIYEYSFSDHTLCVNDVVIGYGGCNAIIASASDDRTCKVWTLSNGMLQRNIVFPSKIKAIALDPAEHVLYAGSEDGKIFVAALNTTRITTNDQVSYITGSFSNHSKAVTCLAYSAAENFLISGSDDGIVRVWNASTHNIIRVFKHAKGPITNILVLRQENDLSNPMSSNLQGTSKKKGAQFPPLEKYANSMDEDSDKTTIVSLGGGNICMDVSYLSSQVISSYSKELQSQGSAAASEMEIEKLKRDCQKSVQMVNKWKKMYENLHQFCVKEMLDGNEK*	442

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr7g0361	441	PANTHER	WD-REPEAT PROTEIN 18	2	434	IPR045227	-
	Mtr7g0361	441	Pfam	Neurobeachin beta propeller domain	93	322	IPR046851	-
	Mtr7g0361	441	Gene3D	-	156	376	IPR015943	GO:0005515
	Mtr7g0361	441	ProSitePatterns	Trp-Asp (WD) repeats signature.	283	297	IPR019775	-
	Mtr7g0361	441	SMART	WD40_4	257	296	IPR001680	GO:0005515
	Mtr7g0361	441	SMART	WD40_4	163	204	IPR001680	GO:0005515
	Mtr7g0361	441	SMART	WD40_4	110	149	IPR001680	GO:0005515
	Mtr7g0361	441	SMART	WD40_4	70	107	IPR001680	GO:0005515
	Mtr7g0361	441	SMART	WD40_4	207	245	IPR001680	GO:0005515
	Mtr7g0361	441	ProSiteProfiles	Trp-Asp (WD) repeats profile.	264	305	IPR001680	GO:0005515
	Mtr7g0361	441	PANTHER	WD REPEAT-CONTAINING PROTEIN 18	2	434	-	-
	Mtr7g0361	441	Gene3D	-	4	155	IPR015943	GO:0005515
	Mtr7g0361	441	ProSiteProfiles	Trp-Asp (WD) repeats profile.	117	150	IPR001680	GO:0005515
	Mtr7g0361	441	ProSiteProfiles	Trp-Asp (WD) repeats circular profile.	264	299	-	-
	Mtr7g0361	441	ProSiteProfiles	Trp-Asp (WD) repeats circular profile.	117	150	-	-
	Mtr7g0361	441	SUPERFAMILY	WD40 repeat-like	10	319	IPR036322	GO:0005515
	Mtr7g0361	441	PRINTS	G protein beta WD-40 repeat signature	136	150	IPR020472	-
	Mtr7g0361	441	PRINTS	G protein beta WD-40 repeat signature	191	205	IPR020472	-
	Mtr7g0361	441	PRINTS	G protein beta WD-40 repeat signature	283	297	IPR020472	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr7g0361	Mtr-Chr7	5616303	5621089	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mtr7g0361	80	338	Eukaryotic Initiation Factors Gene Family	AT2G46280	22.727	1.03e-09	57.0

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr7g0361	K14829		-	gmx:100791195	630.943