Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g0355 ATGGGTTCCATTTGTTCTTGTTTAAGTGTTGATGATTTTGAAGATTACATGAATCCGCATAGTCATGTGTATAGGAACTGCGTTTGTGTCGGTTGCTTCCTACAAAACATTTCGGCTGTTTATTCATCAATATTCCATAGAAGGGAAATGCAGGCGCTTCCTTCATCTGTACAGGGGGCGGCATCTATGACTAATACAGCATCACTTGATAATTCTCTAGCTGAGATATACCGTTCTCCTCCAAGGCCGTTACCTTATGATGCAGACCCTAGGCATTTCCGCTCACAGCATGACGGACTTGTTTCAAGACGTGAGAAGGGTTCCAGTCATTTGAATGAAGAGTCAGAACCTCTAAGGGTTGATGTGGATGTAGATCCAGAATCTTTGAGTTCGAGTGGTAAGTGGAAAGAATCCACCGGAAAAGATGGGTCAAAGGAATACCGTTCCAAGTCCTCAGTAAGACTTTCGTCAGCAAAACTTACAACTGGAGCTGCGCTTGTGTATGCATCATCAGAAGAGGAGGATGTTTGTCCAACATGTCTTGAAGAATACACTGAAGAGAATCCGAAGATAGTGACAAAATGTAATCACCATTATCATCTTGGTTGCATATACGAGTGGATGGAGAGAAGTGACAGCTGTCCTGTTTGTGGGAAGGTGATGTTATTCGATGAATCGCCATAA 684 0.4284 MGSICSCLSVDDFEDYMNPHSHVYRNCVCVGCFLQNISAVYSSIFHRREMQALPSSVQGAASMTNTASLDNSLAEIYRSPPRPLPYDADPRHFRSQHDGLVSRREKGSSHLNEESEPLRVDVDVDPESLSSSGKWKESTGKDGSKEYRSKSSVRLSSAKLTTGAALVYASSEEEDVCPTCLEEYTEENPKIVTKCNHHYHLGCIYEWMERSDSCPVCGKVMLFDESP* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g0355 227 Pfam RING-H2 zinc finger domain 172 217 IPR024766 GO:0008270
Mtr7g0355 227 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 1 226 - -
Mtr7g0355 227 SUPERFAMILY RING/U-box 171 223 - -
Mtr7g0355 227 ProSiteProfiles Zinc finger RING-type profile. 177 217 IPR001841 -
Mtr7g0355 227 SMART ring_2 177 217 IPR001841 -
Mtr7g0355 227 MobiDBLite consensus disorder prediction 99 123 - -
Mtr7g0355 227 MobiDBLite consensus disorder prediction 99 153 - -
Mtr7g0355 227 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 154 223 IPR013083 -
Mtr7g0355 227 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g0355 Mtr-Chr7 5568651 5573777 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g0355 1 227 C3H Transcription Factor Family AT5G15790 55.603 1.81e-89 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g0355 - - gmx:100788192 389.808