Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g0335 ATGGGTTTCTCTTTCTTATCAAAATCAAGAACTCCTTGCATTCTCTTCTTGTTTCTACTTTCTTTCACTTCAACAGATGCTTATGACCCACTTGACCCAAATGGTAATATCACGATCAAATGGGATATTATACAATGGACCCCTGATGGTTATGTTGCCACAGTTACGATGAACAATTTCCAACAATATCGTCACATCGCTTCCCCTGGCTGGTCACTAGGATGGACATGGGCAAAAAAGGAGGTAATCTGGAGTATGGTGGGATCACAGACCACGGAACAAGGTGATTGTTCAAAATTTAAAGGAAATGTTCCACATTGCTGTAAAAAGAATCCAACCGTTGTAGATTTACTTCCCGGAACGCCTTACAATCAGCAAATTGCAAATTGCTGCAAAGGTGGTGTGCTTAGTTCATGGGCTCAAGATCCTACCATGGCAGTTGGGGCGTTTCAAATCAGTGTTGGTAGAGCCGGAACCACAAACAAAACTGTTAAAGTGCCTAAAAACTTCACCTTGAATGCCCCGGGACCCGGTTATACTTGTGGGCCGGCAAAAATTGTGAGACCTACTCAGTTTATTCAACCAGACAAAAGGAGAGTGACTCAAGCACTCATGACATGGAATGTTACATGCACATATTCACAATTTCTGGCTCAGAAAACTCCGACTTGCTGTGTCTCCCTCTCATCTTTCTATAACGATACCATTGTACCCTGCCCAACATGTGCATGTGGCTGCCAGAGTAACTCATCTCAGTCCGGAACTTGTGTTAATCCAAATACGCCACATTTGGCATCGGTTGTTTCTGGTAATGGAAAGAATAATTTATCACCTTTGGTTCAATGTACTAGTCATATGTGTCCAATCCGAATCCACTGGCATGTTAAGGTTAACTACAAGGAATACTGGCGTGTGAAGGTTTCCATTACTAATTTTAATTACCGTATGAATTATTCCGATTGGAACTTGGTTGTTCAGCATCCAAACTTCGACAATTTGACTCAGCTGTTCAGTTTCAACTACAAGTCATTAAATCCTTATGGTTTAATAAATGATACAGCAATGCTTTGGGGAGTTAAGTTCTATAATGATTTTCTTAATCATGCCGGCCCTAGTGGCAATGTTCAATCTGAGCTACTCTTCCGAAAGGATAAATCAACTTTCACTTTTGATAAGGGCTGGGCTTTCCCTCGAAGGATCTACTTCAACGGCGACAATTGTGTGATGCCACCACCTGATGCTTATCCATGGTTACCTAATACTGGTTCTCGGCAAGAGGTTTCATTGTTTGCTTTAGTAATGGCCTCCTTGGCAGTCTTAGCATTCTATGCATATGTTTAA 1341 0.4154 MGFSFLSKSRTPCILFLFLLSFTSTDAYDPLDPNGNITIKWDIIQWTPDGYVATVTMNNFQQYRHIASPGWSLGWTWAKKEVIWSMVGSQTTEQGDCSKFKGNVPHCCKKNPTVVDLLPGTPYNQQIANCCKGGVLSSWAQDPTMAVGAFQISVGRAGTTNKTVKVPKNFTLNAPGPGYTCGPAKIVRPTQFIQPDKRRVTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNDTIVPCPTCACGCQSNSSQSGTCVNPNTPHLASVVSGNGKNNLSPLVQCTSHMCPIRIHWHVKVNYKEYWRVKVSITNFNYRMNYSDWNLVVQHPNFDNLTQLFSFNYKSLNPYGLINDTAMLWGVKFYNDFLNHAGPSGNVQSELLFRKDKSTFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWLPNTGSRQEVSLFALVMASLAVLAFYAYV* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g0335 446 Pfam COBRA-like protein 51 214 IPR006918 GO:0010215|GO:0031225
Mtr7g0335 446 PIRSF COBRA 3 446 IPR006918 GO:0010215|GO:0031225
Mtr7g0335 446 PANTHER PROTEIN COBRA 8 445 IPR006918 GO:0010215|GO:0031225
Mtr7g0335 446 PANTHER COBRA-LIKE PROTEIN 8 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g0335 Mtr-Chr7 5246362 5250658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g0335 14 444 COBRA Gene Family AT3G02210 75.632 0.0 699
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g0335 - - gmx:100783820 850.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g0458 6 5491438 5494491 Mtr7g0335 7 5246362 5250658 PCT
Mtr7g0335 7 5246362 5250658 Mtr6g0457 6 5486635 5491128 PCT