LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr7g0282	ATGGATCAAAGAAAAAATATCTTTGTTCATGTAGTTATTTTTTTGGCCATGGTTCTTCTTAGAGGAAGTAATGTTGAAGCAAATGGAGAAGAAGAGAAAGATAGGATTTTCAAGCTTCCTGGTCAACCTAAAGTTTTGTTTAAGCAATTTTCTGGCTATGTTACTGTTAATCATGTTGCTGGTAGAGCTCTCTTTTATTGGTTAACTGAAGCTGAACAAAATCCTCTCAATAAACCACTTGTCATTTGGCTTAATGGAGGTCCAGGTTGTTCATCAGTGGCATATGGAGCATCTGAAGAGATTGGTCCATTTAGATTAAACAAAACAGCTTCTGGCCTTTACATTAACAAGTTTGCATGGAACACAGTGGCCAACCTTTTATTCTTGGAAGCTCCCGCCGGCGTCGGCTTCTCCTACAGCAACCGGTCTTCAGACCTCCTTGACACCGGCGACCGCCGTACTGCCAAGGACTCTCTAGAATTTGTAATCCAGTGGCTAGAAAGATTCCCACGTTACAAAAATAGGGAACTTTATATCACAGGAGAGAGTTATGCAGGACATTATGTCCCTCAATTAGCAAAGGAAATTATGACCTATAACATAAAAGCCAAGCAACGCATCAATCTCAAGGGAATAATGGTTGGAAATGCAGTGACAGACAACTATTATGATAACTTGGGCACAGTGACGTACTGGTGGAGCCATGCTATGATATCTGATCAAACATACAAACAACTTATTAGTACTTGTGATTTTCACCACCAGAAAGAATCCAATGAATGTGAATCTTTATATAGCTATGCTATGGATCAAGAATTCGGTAACATTGATCAGTATAATATCTATGCTCCTCCATGTAACAATTCTGACGGCAGCTCGTCCGGTACCCGCCACACGCTTCGGTTGCCCCACCTTCCTCATGTGGCTTTTAGACAAATGGCTGGTTATGATCCATGTACAGAAAAATATGCAGAAGTTTACTACAATAGGCCAGATGTTCAAAAAGCACTTCATGCAAACACAACAGGCATTCCTTATAAGTGGACTGCTTGCAGTGAAGTTTTGAATAGAAACTGGAATGATACAGATGTATCTGTTCTTCCACTATATAGAGAGTTGATAGCTCATGGTGTAAGAGTTTGGGTTTTCAGTGGGGATGTAGACTCAGTGGTTCCAGTTACAGCAACAAGATATGCCCTTGCACAGCTTAAGTTGGCAACTAAAATACCATGGTATCCTTGGTATGTCAAAAAGCAGGTTGGAGGTTGGACCGAGGTGTATGAAGGGCTAACATTTGCCACAGTGAGAGGAGCAGGACATGAAGTCCCACTATTCAAGCCTAGGGCAGCCCTTCAATTATTCAAATCATTCCTTGCAGGAAAGCCTCTTCCAAAAGTCCTAAAATAG	1407	0.4115	MDQRKNIFVHVVIFLAMVLLRGSNVEANGEEEKDRIFKLPGQPKVLFKQFSGYVTVNHVAGRALFYWLTEAEQNPLNKPLVIWLNGGPGCSSVAYGASEEIGPFRLNKTASGLYINKFAWNTVANLLFLEAPAGVGFSYSNRSSDLLDTGDRRTAKDSLEFVIQWLERFPRYKNRELYITGESYAGHYVPQLAKEIMTYNIKAKQRINLKGIMVGNAVTDNYYDNLGTVTYWWSHAMISDQTYKQLISTCDFHHQKESNECESLYSYAMDQEFGNIDQYNIYAPPCNNSDGSSSGTRHTLRLPHLPHVAFRQMAGYDPCTEKYAEVYYNRPDVQKALHANTTGIPYKWTACSEVLNRNWNDTDVSVLPLYRELIAHGVRVWVFSGDVDSVVPVTATRYALAQLKLATKIPWYPWYVKKQVGGWTEVYEGLTFATVRGAGHEVPLFKPRAALQLFKSFLAGKPLPKVLK*	469

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr7g0282	468	Gene3D	-	319	356	-	-
	Mtr7g0282	468	PANTHER	SERINE CARBOXYPEPTIDASE-LIKE 25	11	465	-	-
	Mtr7g0282	468	SUPERFAMILY	alpha/beta-Hydrolases	32	464	IPR029058	-
	Mtr7g0282	468	Pfam	Serine carboxypeptidase	43	459	IPR001563	GO:0004185\|GO:0006508
	Mtr7g0282	468	Gene3D	-	366	460	-	-
	Mtr7g0282	468	ProSitePatterns	Serine carboxypeptidases, histidine active site.	430	447	IPR033124	GO:0004185
	Mtr7g0282	468	Gene3D	alpha/beta hydrolase	30	288	IPR029058	-
	Mtr7g0282	468	PANTHER	SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE	11	465	IPR001563	GO:0004185\|GO:0006508
	Mtr7g0282	468	PRINTS	Carboxypeptidase C serine protease (S10) family signature	116	128	IPR001563	GO:0004185\|GO:0006508
	Mtr7g0282	468	PRINTS	Carboxypeptidase C serine protease (S10) family signature	129	139	IPR001563	GO:0004185\|GO:0006508
	Mtr7g0282	468	PRINTS	Carboxypeptidase C serine protease (S10) family signature	165	190	IPR001563	GO:0004185\|GO:0006508
	Mtr7g0282	468	PRINTS	Carboxypeptidase C serine protease (S10) family signature	430	443	IPR001563	GO:0004185\|GO:0006508
	Mtr7g0282	468	ProSitePatterns	Serine carboxypeptidases, serine active site.	179	186	IPR018202	GO:0004185

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr7g0282	Mtr-Chr7	4254445	4263231	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mtr7g0282	324	463	Calmodulin-binding Proteins	AT2G22960	30.496	7.86e-16	73.9

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr7g0282	K16297		-	gmx:100807680	845.499