Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mtr7g0270 | ATGGAAGGACATTCTCGGAAACATTGTGAAGTCAAAAAGGCCAAAGAATTTCTTAATGAAGTTAAACATAGATTTATTCAAGATAACAGGAGGGATAAGTATGATGATTTTCTGAAAGTCTTGAAGGATTACAAGACAAAAAGGATTGATGATGCAACTATCAGTAAATTATTGAATGGATTATTCGAAGGTCATAGAGATCTTATATCAAGATTGAACTACTTCATGCCTGATGGATTTAAGATCAAGCTTCCAAAAGAGGAGGAAGAATCTCTAGAACATTCTGAAGAAAAAAATGCCAAAGAATTTGTCAATGATGTTAAGTGTAGATTTATTCAAGTTAATCAGAGGGATAAGTGTGATAACTTTTTGAATGTCTTGAATGATTACAAGACACAAAGGATTGATGCTGCGAATCTCAGTAAATTATTAAAGGGATTATTTGAAGGTCATAGAGATCTTATATTAAGATTGAACTATTACATGCCTGATGGATATGCAATCAAGCTTCCATCGGAGGAGGAACAATCTCTGGAACATTGTGAAGCAAAAAATGCCAAAGAATTTTTGAATGAAGTTAAATGTAGATTTATTCAAGTTAATCAGAGGGAAAAGAATGATAACTTTCTGAATGTCTTGAAGGATTACAGGACACAAAGAATTGATGATGCAAATCTGGTTATAAAAATGAAGAAAATATTTGAAGGTCATAGTGATTTAATATCAAGATTAAACTACTTCCTACCTGATGGATATGAAATCAAGCTTCCATTGGAGGAGGAACAAGTTCATGTTAAATTGGAAGATGCTAAAAGTTCTTGA | 822 | 0.3212 | MEGHSRKHCEVKKAKEFLNEVKHRFIQDNRRDKYDDFLKVLKDYKTKRIDDATISKLLNGLFEGHRDLISRLNYFMPDGFKIKLPKEEEESLEHSEEKNAKEFVNDVKCRFIQVNQRDKCDNFLNVLNDYKTQRIDAANLSKLLKGLFEGHRDLILRLNYYMPDGYAIKLPSEEEQSLEHCEAKNAKEFLNEVKCRFIQVNQREKNDNFLNVLKDYRTQRIDDANLVIKMKKIFEGHSDLISRLNYFLPDGYEIKLPLEEEQVHVKLEDAKSS* | 274 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mtr7g0270 | 273 | Gene3D | Paired amphipathic helix | 99 | 163 | IPR036600 | GO:0006355 | |
Mtr7g0270 | 273 | Gene3D | Paired amphipathic helix | 185 | 249 | IPR036600 | GO:0006355 | |
Mtr7g0270 | 273 | PANTHER | PROTEIN, PUTATIVE-RELATED | 201 | 271 | - | - | |
Mtr7g0270 | 273 | PANTHER | PROTEIN, PUTATIVE-RELATED | 1 | 143 | - | - | |
Mtr7g0270 | 273 | PANTHER | PROTEIN, PUTATIVE-RELATED | 144 | 223 | - | - | |
Mtr7g0270 | 273 | SUPERFAMILY | PAH2 domain | 180 | 252 | IPR036600 | GO:0006355 | |
Mtr7g0270 | 273 | PANTHER | SIN3B-RELATED | 144 | 223 | IPR039774 | GO:0003714 | |
Mtr7g0270 | 273 | PANTHER | SIN3B-RELATED | 1 | 143 | IPR039774 | GO:0003714 | |
Mtr7g0270 | 273 | PANTHER | SIN3B-RELATED | 201 | 271 | IPR039774 | GO:0003714 | |
Mtr7g0270 | 273 | SUPERFAMILY | PAH2 domain | 97 | 166 | IPR036600 | GO:0006355 | |
Mtr7g0270 | 273 | ProSiteProfiles | PAH domain profile. | 174 | 251 | IPR003822 | GO:0006355 | |
Mtr7g0270 | 273 | ProSiteProfiles | PAH domain profile. | 7 | 79 | IPR003822 | GO:0006355 | |
Mtr7g0270 | 273 | ProSiteProfiles | PAH domain profile. | 88 | 165 | IPR003822 | GO:0006355 | |
Mtr7g0270 | 273 | Pfam | Paired amphipathic helix repeat | 32 | 75 | IPR003822 | GO:0006355 | |
Mtr7g0270 | 273 | Pfam | Paired amphipathic helix repeat | 207 | 248 | IPR003822 | GO:0006355 | |
Mtr7g0270 | 273 | Gene3D | Paired amphipathic helix | 4 | 79 | IPR036600 | GO:0006355 | |
Mtr7g0270 | 273 | SUPERFAMILY | PAH2 domain | 6 | 78 | IPR036600 | GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mtr7g0270 | Mtr-Chr7 | 4107364 | 4108534 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mtr7g0270 | 14 | 89 | WRKY Transcription Factor Family | AT4G12020 | 34.211 | 4.34e-06 | 46.2 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | Others | Mtr7g0270 | PAH | 2.9e-07 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mtr7g0270 | K11644 | - | mtr:MTR_7g013380 | 529.635 |