Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g0259 ATGGCTATGTCTCACTCTTTTGTTCCTATCATCTTTTTCATGATGTTCCTCATACAAGTCATGTCAACTAGCAGCATTGACTTAAAATGGTACGATGCTCATGCAACCTTCTATGGTGACGCAGCTGGTGGTGAAACCATGAAGGGAGCTTGTGGTTATGGTGATCTCTTCAAACAAGGATATGGTCTTGCAACCGCAGCACTAAGCACAGCTCTATTCAATAATGGACTTACTTGTGGTGCATGTTTTCAAATATTTTGTGTCAATGACCCTAAATGGTGCATAAAGGGTGCACACCCAATCACGATAACCGCAACAAATTTTTGTCCTCCAGATTACTCTAAGACTCATGATGTTTGGTGTAATCCTCCGCAAAAACACTTCGATTTAAGCTATAAAATGTTCACCTCTATTGCCTATTACAAAGCAGGTATCGTCCCGGTTAAATATCGACGTGTTCCATGCATCAAAAGTGGTGGTGTTAGATTCGAGCTCAAAGGAAACCCTAATTTCTTTCTAGTTTTGGTGCACAATGTTGCCAATGCTGGTGATGTTTCTCGTGTGAGTATTAAAGGGTCCAAGACAAGTTGGATTTCTATGTCACGTAATTGGGGACAAAATTGGCATCCTGGATCTAATTTTGTAGGACAAGCTTTGTCATTTCAAGTTAGTACAAGTGATGGAAAAACTTTAACGTTTGATTCCGTTGTTCCTTCCAACTGGCAATTTGGACAGACTTATCAGGCCAAGGGAAATTTTTAG 762 0.4029 MAMSHSFVPIIFFMMFLIQVMSTSSIDLKWYDAHATFYGDAAGGETMKGACGYGDLFKQGYGLATAALSTALFNNGLTCGACFQIFCVNDPKWCIKGAHPITITATNFCPPDYSKTHDVWCNPPQKHFDLSYKMFTSIAYYKAGIVPVKYRRVPCIKSGGVRFELKGNPNFFLVLVHNVANAGDVSRVSIKGSKTSWISMSRNWGQNWHPGSNFVGQALSFQVSTSDGKTLTFDSVVPSNWQFGQTYQAKGNF* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g0259 253 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 170 249 IPR007117 -
Mtr7g0259 253 Pfam Expansin C-terminal domain 161 238 IPR007117 -
Mtr7g0259 253 Gene3D - 18 155 IPR036908 -
Mtr7g0259 253 SUPERFAMILY PHL pollen allergen 157 248 IPR036749 -
Mtr7g0259 253 PANTHER EXPANSIN-A15 10 253 IPR002963 GO:0009664
Mtr7g0259 253 PRINTS Expansin/Lol pI family signature 29 44 IPR007118 GO:0005576
Mtr7g0259 253 PRINTS Expansin/Lol pI family signature 47 65 IPR007118 GO:0005576
Mtr7g0259 253 PRINTS Expansin/Lol pI family signature 69 87 IPR007118 GO:0005576
Mtr7g0259 253 PRINTS Expansin/Lol pI family signature 143 159 IPR007118 GO:0005576
Mtr7g0259 253 PRINTS Expansin/Lol pI family signature 197 211 IPR007118 GO:0005576
Mtr7g0259 253 PRINTS Expansin/Lol pI family signature 235 249 IPR007118 GO:0005576
Mtr7g0259 253 SMART dpbb_1 65 150 IPR007112 -
Mtr7g0259 253 SUPERFAMILY Barwin-like endoglucanases 29 178 IPR036908 -
Mtr7g0259 253 PANTHER EXPANSIN-A21-RELATED 10 253 - -
Mtr7g0259 253 Pfam Lytic transglycolase 65 150 IPR009009 -
Mtr7g0259 253 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 48 160 IPR007112 -
Mtr7g0259 253 Gene3D - 160 253 IPR036749 -
Mtr7g0259 253 PRINTS Expansin signature 60 74 IPR002963 GO:0009664
Mtr7g0259 253 PRINTS Expansin signature 87 98 IPR002963 GO:0009664
Mtr7g0259 253 PRINTS Expansin signature 101 111 IPR002963 GO:0009664
Mtr7g0259 253 PRINTS Expansin signature 118 135 IPR002963 GO:0009664
Mtr7g0259 253 PRINTS Expansin signature 135 148 IPR002963 GO:0009664
Mtr7g0259 253 PRINTS Expansin signature 159 171 IPR002963 GO:0009664
Mtr7g0259 253 PRINTS Expansin signature 171 192 IPR002963 GO:0009664
Mtr7g0259 253 PRINTS Expansin signature 206 227 IPR002963 GO:0009664
Mtr7g0259 253 PRINTS Expansin signature 235 251 IPR002963 GO:0009664
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g0259 Mtr-Chr7 3986869 3988065 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g0259 19 253 Expansin Gene Family AT5G39280 65.532 2.17e-119 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g0259 - - zju:107415875 377.481