LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr7g0231	ATGGGGTTGAAATTAACAAAGCAGGGTTCACCACCCAAAATTAGTAGTCCAGCAAGTTTGCAATTACATGAAAGAATGATTCATTACCTTACCAAGAATTTTATCCGTAACTTGGTATCCAAGCAAAGGAGAAGAATTCTTATCGCTGGTTATGATCTTGATATGTCATATATCACAGATAGAGTATTAGCAATGTCATTTCCTGCTGAACGTATGAGAGCAATGTATAGAAATCCTCTCTGGCAAGTCAAATCTGTGTTGGATATGAGACATCTTGAACATTATAAGGTCTATAATCTGTGTATAGAAGAACATTATGATCCAGCACAGTTCTATGGTCGTGTGGAAGAATACCCTTTTGATGACAATCATGTTCCATCTCTTGAAATGATTAAAGATTTCTGCGAAAGTGTGAATTCATGGCTGACACGTGACCCAAAAAATATTGTAGTTATACATTGCATGGCAGGTAAAGGTAGAACTGGTTTGATGGTGAGTTCATACCTAACTTATTGCGGCATGTCAGCAGATGAAGCTCTTCAATTATATGCCGACAGAAGGACTACCAATAATGAAGGAGTATCAATACCAAGCCAACGTCGCTATGTAGGGTACTGGGAAAGTTTACTTTCTGTACCTAGAGGTGCTGGATATGGACCTCCAAAGGTGACTTTGCCTCAACCGTGTAGCAGAGAATTGCGGCGAGTCCGGTTGTATGACACTGTCAACATTGACACAGTATTCTTTGTTATATCAGAACTGCAGGAGATTCCTAATGAGGTCTATCGTCCATCAGTGGAGGTTTGTCGGAGCTGCTGTAGAGAAGTTAAGAAAGGTTATCAGAGAACAAACAGTCCTCGCTATTATATTTCTACTATTCCTCAAGGTGATGAAGATGGAGAACAATCAGAAATAGAAGAACCTCGTGTTGTAGTTCAAATGGATACAGAGTCTCCTGCAATATACCAGAAATCTTGTTTGGACCATTATTTTGATAAACCTATACAAGTAACCGGAGATGTACGTGTGATATTCTACGAGAAAATGATTGGAGGACGTCTTTTCTACTGCTGCTTTAATACAGCTTTTATTAGGAACAGCTTACTACAGCTCACAGTAAATGAATTGGACAAAGTTGGGAAGAAAGGAAGATCAATATGTGGCCCTACTTTCTGCCTGGAATTATTGTTTGGTCCTGCTAATACAGGGTATTCATCATCAAGTATATCTATTGGTGAAAACTCTAGTGATGATTCATTATAA	1263	0.3872	MGLKLTKQGSPPKISSPASLQLHERMIHYLTKNFIRNLVSKQRRRILIAGYDLDMSYITDRVLAMSFPAERMRAMYRNPLWQVKSVLDMRHLEHYKVYNLCIEEHYDPAQFYGRVEEYPFDDNHVPSLEMIKDFCESVNSWLTRDPKNIVVIHCMAGKGRTGLMVSSYLTYCGMSADEALQLYADRRTTNNEGVSIPSQRRYVGYWESLLSVPRGAGYGPPKVTLPQPCSRELRRVRLYDTVNIDTVFFVISELQEIPNEVYRPSVEVCRSCCREVKKGYQRTNSPRYYISTIPQGDEDGEQSEIEEPRVVVQMDTESPAIYQKSCLDHYFDKPIQVTGDVRVIFYEKMIGGRLFYCCFNTAFIRNSLLQLTVNELDKVGKKGRSICGPTFCLELLFGPANTGYSSSSISIGENSSDDSL*	421

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Mtr7g0231	420	CDD	PTP_PTEN	54	209	IPR045101	GO:0016791
Mtr7g0231	420	Pfam	C2 domain of PTEN tumour-suppressor protein	317	397	IPR014020	-
Mtr7g0231	420	SMART	PTEN_C2_2	226	399	IPR014020	-
Mtr7g0231	420	Gene3D	Protein tyrosine phosphatase superfamily	30	212	IPR029021	-
Mtr7g0231	420	SUPERFAMILY	(Phosphotyrosine protein) phosphatases II	50	210	IPR029021	-
Mtr7g0231	420	ProSiteProfiles	C2 tensin-type domain profile.	244	400	IPR014020	-
Mtr7g0231	420	ProSitePatterns	Tyrosine specific protein phosphatases active site.	152	162	IPR016130	GO:0016311\|GO:0016791
Mtr7g0231	420	Gene3D	-	286	402	-	-
Mtr7g0231	420	Pfam	Tyrosine phosphatase family	145	184	IPR026893	GO:0004721
Mtr7g0231	420	ProSiteProfiles	Phosphatase tensin-type domain profile.	44	213	IPR029023	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr7g0231	Mtr-Chr7	3698318	3702407	Dispersed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mtr7g0231	1	404	Protein tyrosine phosphatase (PTP) family	AT5G39400	67.901	0.0	580

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr7g0231	K01110		-	gmx:100809938	723.391

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mtr7g0231	7	3698318	3702407	Mtr7g0231	7	3698318	3702407	ECH

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