Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g0217 ATGGGTTGTGTAAACTCCAAGAAAGCTCTGACCGGAGAAATCGATACGCTTTCTCCGGTTGGACCTTACGTTCATTCGAGTTCTTCTCGAAAAAGGAGCAATGGTTCAGGTAGAAGCATGGTGGTGGAGGCTTCTGCTCATTCTTCTAGAGAACAACATTCTAGACAACATTCTGGGGTTGTGACACAACAACCGGTTGACACGAAACCCGAGGAGTGGAAAAAGGGTGATTTGAATGTGAGGATTGGTTCACATAGGTTTGCTCAAGGTGAACAGATTGCTGCTGGTTGGCCTTCTTGGCTTACTTCTGTTGCTGGTGAAGCCATTCATGGTTTGGTCCCTCTCAAAACTGATGCTTTTGAGAAATTAGATAAGGTTGGACAAGGTACATATAGCAGTGTTTTCCAAGCACGCGAAGTCGAGACAGGGAGGATGGTTGCCTTGAAGAAGGTGCGGTTGGACACACTTCAACACGAGAGCATTAGGTTCATGGCGCGGGAGATAATAATCCTCCGCACACTTGATCACCCGAACGTCATGAAATTAGAGGGTATAATCACTTCACAACTATCAAAGAGTATATACCTTGTATTTGAATACATGGAACATGATCTTGCTGGCCTATTATCTAACCCTGATGTCAAGTTCACTGACTCACAGATTAAGTGTTACATGAGACAACTATTGAGTGGACTCGAGCATTTTCACCTACGAGGTATCATGCATCGAGACATTAAAGTATCAAATATATTAGTTAACAATGAAGGCATTCTCAAGATAGGGGACTTTGGATTAGCAAATACCGTTAGCCCAAATAGCAAGCATCCTTTAACAAGTCGTGTAGTGACTCTATGGTATCGTCCTCCCGAGCTTTTGATGGGATCAACAAACTATGGAGTTACGGTGGATTTGTGGAGCGTAGGGTGTGTGTTTGCTGAACTTTTTATGGGGAAGCCCATCCTTAAGGGTAGAACTGAGGTGGAACAATTGCACAAAATATTTAAGCTTTGTGGATCTCCACCAGAAGAGTTTTGGAAAAAGAATAAGCTTCCGCTTGCAACAATGTTTAAGCCTCAGATTAGTTACGAAAGCTCCCTTGAGGACAGGTGTCAAGGTTTTCTTCCTGCAACCGCTGTGAGCCTACTTCAGACTTTACTCTCTGTTGATCCTTCCAAACGTGGTACTGCCTCCTCTGCACTTATGTCCGAGTATTTCAACACTGCGCCATATGCTTGTAACCCGTCACTCCTTCCAAAGTATATACCAAGCAAAGAAATGGATGCTAAAAATCGGGATGACGCGAACAGGAAAAAGAATGGAGGTAAAGTGCGAGAGCGCGAGGCTGTAACATCAGGAAGGCAAAGACGGGTCCATAAAGTTCTTCAGGATCCTAACAGTGCCGGCAAACCAGCTTTGAAAGAGAATATTTCTCAAAACGCTCGTAGACATGATGATGGTAAAGCACATCATACAAAAGGAAAAGTAGGACCTGTGAACAAAGAGCAACAGAAACATTTGTTTGATTCAAAATCAGATCAGGCTGCACAAAAGTCAAATGCTTACAATGGCTATAGTGCATACTCGGGACCAGTACCAGTCTCAGGATCTAGTGGCTTTAAATGGGCGAAAAGTAGAAAACTGGATGCTTCGTCCATTCTATCAGATGGATCCAGAAGCAAAATCAGTGCAATGGATCCAACTTTTGCGAAAGGCACATATGATTTAACGAAACATGGGATGGAAGTTTCGGAAAGAAGACATAATTACAACACAAGCCATGACGATGAGACTTCCAAGCGTGTAGTAAAAAAGCAGCAGGGTCGTAATGTAGAATCGTTTGATGTATCTGATATATACCAGTCCAATTACTTCATGGATTTTGATCTCACAGACAAACCAGATGCTCAAATGAATCCACAGGACCACAGAAATCATGCCGAGCCTGTGGAACAATCAGTACCAACGACGATCCAAACAAATAAAAATGATGAGTTGTTAGGTTGGAACGAAAACAAAGTGCGGCGGCAATCTGGTCGTAAATCAAGGCTGGGAATAGACAAATGA 2064 0.4307 MGCVNSKKALTGEIDTLSPVGPYVHSSSSRKRSNGSGRSMVVEASAHSSREQHSRQHSGVVTQQPVDTKPEEWKKGDLNVRIGSHRFAQGEQIAAGWPSWLTSVAGEAIHGLVPLKTDAFEKLDKVGQGTYSSVFQAREVETGRMVALKKVRLDTLQHESIRFMAREIIILRTLDHPNVMKLEGIITSQLSKSIYLVFEYMEHDLAGLLSNPDVKFTDSQIKCYMRQLLSGLEHFHLRGIMHRDIKVSNILVNNEGILKIGDFGLANTVSPNSKHPLTSRVVTLWYRPPELLMGSTNYGVTVDLWSVGCVFAELFMGKPILKGRTEVEQLHKIFKLCGSPPEEFWKKNKLPLATMFKPQISYESSLEDRCQGFLPATAVSLLQTLLSVDPSKRGTASSALMSEYFNTAPYACNPSLLPKYIPSKEMDAKNRDDANRKKNGGKVREREAVTSGRQRRVHKVLQDPNSAGKPALKENISQNARRHDDGKAHHTKGKVGPVNKEQQKHLFDSKSDQAAQKSNAYNGYSAYSGPVPVSGSSGFKWAKSRKLDASSILSDGSRSKISAMDPTFAKGTYDLTKHGMEVSERRHNYNTSHDDETSKRVVKKQQGRNVESFDVSDIYQSNYFMDFDLTDKPDAQMNPQDHRNHAEPVEQSVPTTIQTNKNDELLGWNENKVRRQSGRKSRLGIDK* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g0217 687 MobiDBLite consensus disorder prediction 424 515 - -
Mtr7g0217 687 MobiDBLite consensus disorder prediction 476 511 - -
Mtr7g0217 687 ProSitePatterns Protein kinases ATP-binding region signature. 126 149 IPR017441 GO:0005524
Mtr7g0217 687 MobiDBLite consensus disorder prediction 424 462 - -
Mtr7g0217 687 PANTHER CYCLIN-DEPENDENT KINASE 79 580 - -
Mtr7g0217 687 PANTHER CELL DIVISION PROTEIN KINASE 79 580 - -
Mtr7g0217 687 MobiDBLite consensus disorder prediction 649 666 - -
Mtr7g0217 687 ProSiteProfiles Protein kinase domain profile. 120 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr7g0217 687 ProSitePatterns Serine/Threonine protein kinases active-site signature. 240 252 IPR008271 GO:0004672|GO:0006468
Mtr7g0217 687 MobiDBLite consensus disorder prediction 21 47 - -
Mtr7g0217 687 SMART serkin_6 120 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr7g0217 687 MobiDBLite consensus disorder prediction 667 687 - -
Mtr7g0217 687 CDD STKc_CDK9_like 120 405 - -
Mtr7g0217 687 SUPERFAMILY Protein kinase-like (PK-like) 115 410 IPR011009 -
Mtr7g0217 687 MobiDBLite consensus disorder prediction 15 69 - -
Mtr7g0217 687 Gene3D Transferase(Phosphotransferase) domain 1 203 444 - -
Mtr7g0217 687 Pfam Protein kinase domain 120 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr7g0217 687 MobiDBLite consensus disorder prediction 634 687 - -
Mtr7g0217 687 Gene3D Phosphorylase Kinase; domain 1 111 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g0217 Mtr-Chr7 3483543 3489029 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g0217 117 530 Core Cell Cycle Gene Families AT5G10270 41.309 1.97e-101 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Mtr7g0217 Pkinase 1.7e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g0217 - - lja:Lj1g3v2982400.1 950.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g0217 7 3483543 3489029 Mtr7g0217 7 3483543 3489029 ECH
Mtr7g0217 7 3483543 3489029 Mtr6g0333 6 4008104 4010980 ECH