Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g0213 ATGACAAGAAAGAGAAAGATTTCTGAAACACTGGTTGAAGACATTAATCCTTATGAGACAATCAAGGAATGGAATGAGGTAATGAAGGAACCTAGTTCACTAGAAAAAAGAAGCAGAAAGAGATTTGTTGGTGTGAGACAAAGGCCATCAGGAAGATGGGTAGCTGAGATAAAAGATACCATTCAGAAGATAAGAGTTTGGTTAGGAACTTTTGATACAGCTGAAGAAGCTGCAAGAGCCTATGATGAAGCTGCATGTATACTTCGCGGTTCCAACACTAGAACAAATTTCTTACCTTGTTCTAAATCTTCCTCTAGAAATCATGTTCTTTCTTCAAAGATCACTAATCTCCTCTTTCAAAAACTTAAAGAAAGGAATTATCCTTGCGGTTGTGGTCGCAGTTGCGAACCTTTAAACTGCGGTAAAATACAGGAAAATGAGGCTGATGCGGACAAAATTGCCGTTGCGATGTCATTACCGAGACCTCAAAATCCATTATATTGCACTAAAATGCAAGAAAATGTGGCCGATACGGTCAAAACTGCGGTGGTGATGCTGCAGAGACCTCAAAATCCTTTATATTACGACTGGAGTTGCAAACCTTTATATTACGGTAAAGTGCAGGAAAATACGGCCGATGCGGTCGAAATTGCGGTTGCTATGCCACAGAGACCCCAAAATTCTTTATATTGCGGCCACATTCTCAGTTGCGGACCTCAATTTAAAACCATTTCTTCACCTTCTTGTTCTTCCAACTCTCTTTTTATCAACCAACAACAAAAAAAACAAGGAAATGTATATGGAAATGAATCAACATATTTCACAAATGAACAATTTATAGATTTCTTTGATGGTCCTGAAGAAGATTGTTGCACAATTAACAGCATTGAATTTAGTAACAACAGTAGTGCACAAATTGACTGCATTACAAGTAGTTTTGAATCATGTTTAACTGAAAAAGATGAATTCATTTGCAAGGAAAAGGAAACTACATCAAGTGATGAAAGAGTGGAAGACATTGAAGAAAACACTGGTTTGAGTTTCAACCAAGATTTTCAATTCCTTGACAATGTTGATGATGCTGCAATGAACTATTATTCTGCTTTTAATATTGATCATGAAGATATTGAGAAGCATGTGGAGTTAGAGATCAATGATGATAGTGATGAGTCTTCAATGCTAAGAAATGCTATGAAGAGAATGAAATATGAGAGGAAATTCTCAGCTTCTCTTTATGCTTTCAATGGAATACCTGAGTGCTTGAAGTTGAAACTTGAATCAGATAACAAAATGGGAAGAGAGTTTTCTAATGAACTAACCAACCTCGAAATGGCTTGTAGCAAAAAAAAAAGGATGCTTATAAGAAGGATGAATGATACATACAACCTGTAA 1392 0.3642 MTRKRKISETLVEDINPYETIKEWNEVMKEPSSLEKRSRKRFVGVRQRPSGRWVAEIKDTIQKIRVWLGTFDTAEEAARAYDEAACILRGSNTRTNFLPCSKSSSRNHVLSSKITNLLFQKLKERNYPCGCGRSCEPLNCGKIQENEADADKIAVAMSLPRPQNPLYCTKMQENVADTVKTAVVMLQRPQNPLYYDWSCKPLYYGKVQENTADAVEIAVAMPQRPQNSLYCGHILSCGPQFKTISSPSCSSNSLFINQQQKKQGNVYGNESTYFTNEQFIDFFDGPEEDCCTINSIEFSNNSSAQIDCITSSFESCLTEKDEFICKEKETTSSDERVEDIEENTGLSFNQDFQFLDNVDDAAMNYYSAFNIDHEDIEKHVELEINDDSDESSMLRNAMKRMKYERKFSASLYAFNGIPECLKLKLESDNKMGREFSNELTNLEMACSKKKRMLIRRMNDTYNL* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g0213 463 CDD AP2 40 97 IPR001471 GO:0003700|GO:0006355
Mtr7g0213 463 Pfam AP2 domain 41 90 IPR001471 GO:0003700|GO:0006355
Mtr7g0213 463 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 266 436 - -
Mtr7g0213 463 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 4 135 - -
Mtr7g0213 463 PANTHER AP2/ERF DOMAIN TRANSCRIPTION FACTOR 266 436 - -
Mtr7g0213 463 PANTHER AP2/ERF DOMAIN TRANSCRIPTION FACTOR 4 135 - -
Mtr7g0213 463 ProSiteProfiles AP2/ERF domain profile. 41 98 IPR001471 GO:0003700|GO:0006355
Mtr7g0213 463 SUPERFAMILY DNA-binding domain 41 97 IPR016177 GO:0003677
Mtr7g0213 463 Gene3D AP2/ERF domain 40 98 IPR036955 GO:0003700|GO:0006355
Mtr7g0213 463 SMART rav1_2 41 104 IPR001471 GO:0003700|GO:0006355
Mtr7g0213 463 PRINTS Ethylene responsive element binding protein signature 42 53 IPR001471 GO:0003700|GO:0006355
Mtr7g0213 463 PRINTS Ethylene responsive element binding protein signature 64 80 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g0213 Mtr-Chr7 3394990 3396748 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g0213 36 118 AP2-EREBP Transcription Factor Family AT5G19790 72.289 5.26e-33 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Mtr7g0213 AP2 1.4e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g0213 K09286 - gmx:100796159 189.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g0213 7 3394990 3396748 Mtr7g0213 7 3394990 3396748 ECH