Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g0196 ATGGGATCAAATGAGAATGTTTCCAATCAAAAAATGGAAAATGAAAAGGTCAAATTTGATGCTGGTGTACGATTCTTTCCGACCGATGAAGAGCTTATAAATCAATACCTTGTCAAGAAAGTTGATGACAATAGCTTCTGTGCTATAGCTATTGCGGAAGTTGATATGAATAAGTGTGAACCATGGGATTTACCAGAGATGGCTAAAATGGGAGAAACAGAATGGTATTTTTTCTGTGTGAGGGACAAAAAATACCCAACTGGTCAAAGGACCAATAGAGCTACTAATGCTGGCTATTGGAAAGCAACAGGCAAAGACAAAGAGATTTACAAGGGAAATTCATTAATTGGGATGAAAAAAACATTGGTTTTCTACAAAGGAAGAGCTCCGAGAGGTGAAAAATCCAACTGGGTCATGCATGAATACAGATTGGAGGGTAACTCACTCTCTAAGCACAACATTTTTCCTGAGCACAACCTTTTTCCTGAGCACAACCTATCCACACATGGAATGAGTGAATGGGTTGTCACTAGAGTCTTTGAGAAGCGTAATTGTGGAAAGAAAATGAATGGTTCAAAACTTGGAAGGTCTAACTCCTCTAGAGAAGAACCATCAAATACTAATGCAGCATCTCTATGGGCTCCATTTTTGGAATTTTCTCCCTACAATAGTGAAAATAAAATCACTATTCCTGATTTCTCAAATGAGTTCAATTCATTCACCAATCCAAATCAATCAGAGAAACCAAAAACACAATATGACAACATTGTTCATAACAATGAAACAAGTATCTTGAACATTTCATCGTCTTCAAAACAAATGGATGTTTACCCTTTAGCTGGAGCAACAGTGGCTGATCCCAACCTAACCTCAATGGCCGGGAATTCTTCAAACTTTTTCTTCTCCCAAGAGTTTTCGTTTGGGAGAGAATTTGATGCGGATGCTGATATCTCATCTGTGGTATATGGAAATGACATGTTTCAAAGGTGGTCTGGGTATCAAGATTTGTCACCAGCTTCTACTGGACTTGCAGCCAATGATAGCTTCTGGAATTTCTGA 1059 0.3834 MGSNENVSNQKMENEKVKFDAGVRFFPTDEELINQYLVKKVDDNSFCAIAIAEVDMNKCEPWDLPEMAKMGETEWYFFCVRDKKYPTGQRTNRATNAGYWKATGKDKEIYKGNSLIGMKKTLVFYKGRAPRGEKSNWVMHEYRLEGNSLSKHNIFPEHNLFPEHNLSTHGMSEWVVTRVFEKRNCGKKMNGSKLGRSNSSREEPSNTNAASLWAPFLEFSPYNSENKITIPDFSNEFNSFTNPNQSEKPKTQYDNIVHNNETSILNISSSSKQMDVYPLAGATVADPNLTSMAGNSSNFFFSQEFSFGREFDADADISSVVYGNDMFQRWSGYQDLSPASTGLAANDSFWNF* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g0196 352 ProSiteProfiles NAC domain profile. 19 182 IPR003441 GO:0003677|GO:0006355
Mtr7g0196 352 SUPERFAMILY NAC domain 17 182 IPR036093 GO:0003677|GO:0006355
Mtr7g0196 352 PANTHER ANAC079/ANAC080/ATNAC4 PROTEIN 5 349 - -
Mtr7g0196 352 MobiDBLite consensus disorder prediction 191 207 - -
Mtr7g0196 352 Pfam No apical meristem (NAM) protein 21 144 IPR003441 GO:0003677|GO:0006355
Mtr7g0196 352 Gene3D NAC domain 28 186 IPR036093 GO:0003677|GO:0006355
Mtr7g0196 352 MobiDBLite consensus disorder prediction 187 207 - -
Mtr7g0196 352 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g0196 Mtr-Chr7 3158895 3161293 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g0196 22 352 NAC Transcription Factor Family AT5G07680 44.606 3.05e-82 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mtr7g0196 NAM 1.3e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g0196 - - cam:101488836 407.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g0196 7 3158895 3161293 Mtr7g0196 7 3158895 3161293 ECH
Mtr7g0196 7 3158895 3161293 Mtr6g0314 6 3831787 3833877 ECH