Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g0191 ATGTCAACGTCATCAAGCAACAATCATCAATTCCGATACACACAAACTCCATCCAAAGTTCTTCACCTTCGCAATCTTCCATGGGAATGTTCTGAAGAGGAACTCGTTGAGCTTTGTAGTCCTTTCGGTAGAATCGTTAACACCAAATGTAATGTTGGCGCTAATCGTAATCAAGCCTTCGTTGAATTCGTGGATCAAAATCAAGCAATTTCAATGGTTTCATATTACGCTTCATCTTCAGAGCCTGCTCAGGTTCGTGGTAAAACTGTTTACATACAATATTCCAATAGACACGAAATTGTCAACAACAAAAGCCCTGGAGATATTCCTGGAAATGTCTTGCTGGTAACTATTGAAGGCGTTGAAGCTGGGGATGTGAGCATTGATGTTATCCACCTGGTGTTTTCTGCTTTTGGCTTTGTTCACAAAATTGCTACATTCGAAAAGACCGCAGGTTTCCAGGCTCTGATTCAGTTCACTGATGCTGAGACTGCTGCTTCAGCTAGGGATGCCCTGGATGGAAGAAGCATACCAAGATACCTGCTTCCAGAGCATGTTGGTTCTTGTAACTTGCGTATTTCATACTCAGCACACAGAGATCTGAATATCAAATTTCAATCAAATCGCAGCAGGGACTATACAAATCCTATGCTTCCTGTCAATCATAGTGCTATTGAGGGGGCAGCACAGCCTGCTATAGGTCCTGATGGGAAGAGGATAGAAACGGAGAGCAATGTGCTTTTGGCTTCCATTGAGAATATGCAGTATGCTGTTACTGTTGACGTCATCAACACGGTGTTCTCTGCATTTGGTACTGTCCAGAAAATTGCTATGTTTGAAAAGAATGGTCAAACTCAGGCACTAATTCAGTACCCAGATGTTACCACGGCAGCAGCTGCTAGAGAAGCATTAGAGGGGCATTGCATATATGATGGTGGCTATTGTAAGCTTCATCTATCATACTCTCGTCATACTGATCTCAATGTAAAGGCTTTCAGTGACAAAAGTAGAGACTATACAGTACCACTAGTTCCTGCACCGGTATGGCAAAATCCTCAGGCTGCACCTATGTACCCTACTAATTCCCCTGCCTATCAGACTCAAGTTCCTGGAGGTTCCCCTGCCTATCAGACTCAAGTTCCTGGAGGACAAGTGCCATCATGGGATCTAACTCAGCATGCAGTTAGACCGGGCTATGTACCTGTTCCTGGTGCTTATCCTGGTCAAACTGGTGCGTTTCCTACAATGCCCTCCTATGGGTCCGCAGCTATGCCTACCGCTTCTTCACCTCTTGCTCAAAGCAGCCATCCTGGGGCTCCTCACAATGTAAACTTACAGCCTAGTGGTGGTTCAACTTCTGGTCCTGGTTCCTCGCCACACATGCAACAAAACCTTGGTGCTCAAGGAATGGTTCGGCCTGGGGCGCCGCCAAATGTGAGACCTGGTGGTGCTTCACCTTCAGGCCAACATTATTATGGTTAG 1482 0.4548 MSTSSSNNHQFRYTQTPSKVLHLRNLPWECSEEELVELCSPFGRIVNTKCNVGANRNQAFVEFVDQNQAISMVSYYASSSEPAQVRGKTVYIQYSNRHEIVNNKSPGDIPGNVLLVTIEGVEAGDVSIDVIHLVFSAFGFVHKIATFEKTAGFQALIQFTDAETAASARDALDGRSIPRYLLPEHVGSCNLRISYSAHRDLNIKFQSNRSRDYTNPMLPVNHSAIEGAAQPAIGPDGKRIETESNVLLASIENMQYAVTVDVINTVFSAFGTVQKIAMFEKNGQTQALIQYPDVTTAAAAREALEGHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTVPLVPAPVWQNPQAAPMYPTNSPAYQTQVPGGSPAYQTQVPGGQVPSWDLTQHAVRPGYVPVPGAYPGQTGAFPTMPSYGSAAMPTASSPLAQSSHPGAPHNVNLQPSGGSTSGPGSSPHMQQNLGAQGMVRPGAPPNVRPGGASPSGQHYYG* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g0191 493 MobiDBLite consensus disorder prediction 421 493 - -
Mtr7g0191 493 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 19 97 IPR000504 GO:0003723
Mtr7g0191 493 CDD RRM1_PTBPH1_PTBPH2 17 97 IPR034792 -
Mtr7g0191 493 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 244 324 IPR000504 GO:0003723
Mtr7g0191 493 PANTHER OS02G0789700 PROTEIN 4 470 - -
Mtr7g0191 493 SMART rrm1_1 20 93 IPR000504 GO:0003723
Mtr7g0191 493 SMART rrm1_1 248 318 IPR000504 GO:0003723
Mtr7g0191 493 Pfam RRM-like domain 244 322 IPR021790 -
Mtr7g0191 493 SUPERFAMILY RNA-binding domain, RBD 250 342 IPR035979 GO:0003676
Mtr7g0191 493 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 23 73 IPR000504 GO:0003723
Mtr7g0191 493 SUPERFAMILY RNA-binding domain, RBD 5 108 IPR035979 GO:0003676
Mtr7g0191 493 CDD RRM3_PTBPH1_PTBPH2 244 340 IPR034794 -
Mtr7g0191 493 PANTHER MATRIN 3/NUCLEAR PROTEIN 220-RELATED 4 470 - -
Mtr7g0191 493 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 111 177 - -
Mtr7g0191 493 CDD RRM2_PTBPH1_PTBPH2 111 205 IPR034793 -
Mtr7g0191 493 Gene3D - 111 223 IPR012677 -
Mtr7g0191 493 Gene3D - 243 347 IPR012677 -
Mtr7g0191 493 Gene3D - 4 110 IPR012677 -
Mtr7g0191 493 SUPERFAMILY RNA-binding domain, RBD 114 211 IPR035979 GO:0003676
Mtr7g0191 493 MobiDBLite consensus disorder prediction 421 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g0191 Mtr-Chr7 3113532 3122338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g0191 214 310 Eukaryotic Initiation Factors Gene Family AT3G16380 25.490 3.63e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g0191 K14948 - gmx:100788927 764.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g0191 7 3113532 3122338 Mtr7g0191 7 3113532 3122338 ECH