Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g0167 ATGGCCGAAGAAGACGAAATGATTGTTGCGGCACCCGATTGTAAGCGAAAGTTCGAAGATTTACACTCTAACGACGGTGAGAACAAGAGTCCCCGTCTTGACGACGATAACCTGAATCACCTAGAGGAAAACGCTTCTTCAGAGGAAGTTCAAGATGTATCTAAAGATAATACAGAAGAAACTACTGACCCCACGGATACCAAAGAGATTCCTGTTGAGGATGCCAAAGAGATTCATGTTGATTCCAGCTCTATTGATCCCACCTTTCAGCATTATGCTTCTTCTTCTAGACAAAATCAACCTATATCCGGCTCTGACACAACAACCACACGAGAAATTGAGGTTCCTAGCAATAAGGAGTTAAATTTGAAGGATCTTTTGGGAAGTATACATGAGTTCGAAAACCTAATGAATGCCATGTTTCCAGAGGCTGATGCTGGAGGTTCTCTTGCACTTTTAGATCGGGTCCTGTCCCCTACTCAGGATATTGTGGAATCTGATCAAATTCAGATACAAGTTCCAAATGAGAAGGAGTTCAATTTAAATGATTTTTTGGAAAGTATAGATAAGGCAGAAAAGCTATTGAATGCCATGATTGCAGAGGATGATGCTGGAGGTTCTCCTGCATTTGTAGCTCGAGGCCTCTCCCCTGCTGATGCTATCGTTGGATCTGATCAAATTCAAATACAAGTTCCAAATGAGAAGTTTTCTCAGATGCCAAGGGGAAAGGCAAATTGTTCATTAGTTGCTAAGAAATCTGAGCCTGAACCTGAGAAGACAGTTGAATCTGATGAGAAGATCGACCTTGAAGAGGAAAATGATCCTGAGGAAGAAATGGAAGAGATTGAATATGAAGAAGTAGAAGAAGAGGAGGAAGTGGAAGAAATAGAAGAGGAGGTGGAAGAAAAGGAGGAGGACGCGGAGGAGGAAGAGGAAGAAGAAGAGAAGGAGGAAGAAGAGGTCGAAGAAGATGATACCATGCAAAACCTTGATGATGATGATGAGAAAAAAAAGCACGCTGAACTTCTTTCTCTTCCTCACCACAAGTCTGAAGTATACGTTGGTGGCATTCCTCTAGATGCCAAAACTGAAGATTTGAAAGAATTTTGTGAGTGTATTGGGGAAGTTGTACAGGTTCGAATATTTAAAGGAAAAGATGCTTCTGAGAATAGGGGCTTTGCTTTTGTTACTTATAGAAGTATAGAACTGGCTTCTAAAGCCATTAAGGAGCTGAATAATACCGAATTTAAGGCTGGGAAAATAAAATGTTCTAAATCTCAAGCAAAAAGTCGTCTTTTTATTGGTAATATTCCTAGAAGCTGGGGCGAAAAAGACCTGAAGAAGGTTGTGTCTGACATTGGACCTGGAGTTACTGCTGTTGAACTAATCAAGGATATGAAGAACATTAGCAATAACCGTGGCTATGCTTTTATCGACTATCATAATAATCAGTGTGCTGAATATTCAAGGCAAAAGATGACGAGCCCATCATTTAAGCTTGGTGACAATTTCCCAACAGTGAACTGGGCTGAACCCAAAAATGCTGATTCCTCTGCTTCATCCCAGGTGAAGGAAGTATATGTGAAGAACCTTCCCAAGAATGTGACTAAAGAGCAGTTGAAGAAGCTTTTTGAACACCATGGGAAGATCACAAAGGTGGTTCTACCGCCACCAAAGCCTGGTCAGGAAAAGAACAGAATTGGCTTTGTACATTTTGCAGAGAGATCAAATGCTATGAAAGCGCTAAAAAACACTGAAAAATATGTATTAGATGGTCAAATTTTAGAGTGTTCGTTAGCAAAACAACAGGCTGATCCGAAGGCCGTAGTATCAAATATACAGACACAAGGATCGCTTCCACGTTATCCACCACATGTCGGTTATGGTTTGGATGGGAATCCCTATGGTGTACTTGGTGCAGGATATGGTGCTCCTGGTCTTGCTCAGCCTTTCACGTATGGACTGGGTCAAACTCCTGGTGGAATTGCCATGATGCCAAAGCTTCTGGTTGATAGACGCATCAGATATGTCTTGCAACAACCAGGATTGCAGCCACACCCCACACACCCTGCACACCCCACCTTCACATCAAAGAGGTGGCATGAGTGGCGGCGGTGGTAG 2121 0.422 MAEEDEMIVAAPDCKRKFEDLHSNDGENKSPRLDDDNLNHLEENASSEEVQDVSKDNTEETTDPTDTKEIPVEDAKEIHVDSSSIDPTFQHYASSSRQNQPISGSDTTTTREIEVPSNKELNLKDLLGSIHEFENLMNAMFPEADAGGSLALLDRVLSPTQDIVESDQIQIQVPNEKEFNLNDFLESIDKAEKLLNAMIAEDDAGGSPAFVARGLSPADAIVGSDQIQIQVPNEKFSQMPRGKANCSLVAKKSEPEPEKTVESDEKIDLEEENDPEEEMEEIEYEEVEEEEEVEEIEEEVEEKEEDAEEEEEEEEKEEEEVEEDDTMQNLDDDDEKKKHAELLSLPHHKSEVYVGGIPLDAKTEDLKEFCECIGEVVQVRIFKGKDASENRGFAFVTYRSIELASKAIKELNNTEFKAGKIKCSKSQAKSRLFIGNIPRSWGEKDLKKVVSDIGPGVTAVELIKDMKNISNNRGYAFIDYHNNQCAEYSRQKMTSPSFKLGDNFPTVNWAEPKNADSSASSQVKEVYVKNLPKNVTKEQLKKLFEHHGKITKVVLPPPKPGQEKNRIGFVHFAERSNAMKALKNTEKYVLDGQILECSLAKQQADPKAVVSNIQTQGSLPRYPPHVGYGLDGNPYGVLGAGYGAPGLAQPFTYGLGQTPGGIAMMPKLLVDRRIRYVLQQPGLQPHPTHPAHPTFTSKRWHEWRRW* 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g0167 706 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 239 697 - -
Mtr7g0167 706 SUPERFAMILY RNA-binding domain, RBD 517 629 IPR035979 GO:0003676
Mtr7g0167 706 MobiDBLite consensus disorder prediction 1 112 - -
Mtr7g0167 706 PANTHER RNA RECOGNITION MOTIF 239 697 - -
Mtr7g0167 706 MobiDBLite consensus disorder prediction 8 81 - -
Mtr7g0167 706 CDD RRM_SF 352 424 - -
Mtr7g0167 706 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 350 428 IPR000504 GO:0003723
Mtr7g0167 706 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 430 512 IPR000504 GO:0003723
Mtr7g0167 706 Gene3D - 249 430 IPR012677 -
Mtr7g0167 706 MobiDBLite consensus disorder prediction 83 112 - -
Mtr7g0167 706 SMART rrm2_1 525 598 IPR003954 GO:0003676
Mtr7g0167 706 SMART rrm2_1 351 424 IPR003954 GO:0003676
Mtr7g0167 706 MobiDBLite consensus disorder prediction 267 330 - -
Mtr7g0167 706 SMART rrm1_1 525 598 IPR000504 GO:0003723
Mtr7g0167 706 SMART rrm1_1 351 424 IPR000504 GO:0003723
Mtr7g0167 706 SMART rrm1_1 431 508 IPR000504 GO:0003723
Mtr7g0167 706 MobiDBLite consensus disorder prediction 252 266 - -
Mtr7g0167 706 SUPERFAMILY RNA-binding domain, RBD 351 516 IPR035979 GO:0003676
Mtr7g0167 706 MobiDBLite consensus disorder prediction 248 333 - -
Mtr7g0167 706 Coils Coil 277 329 - -
Mtr7g0167 706 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 524 602 IPR000504 GO:0003723
Mtr7g0167 706 Gene3D - 431 510 IPR012677 -
Mtr7g0167 706 Coils Coil 181 201 - -
Mtr7g0167 706 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 352 418 IPR000504 GO:0003723
Mtr7g0167 706 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 432 494 IPR000504 GO:0003723
Mtr7g0167 706 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 526 593 IPR000504 GO:0003723
Mtr7g0167 706 Gene3D - 511 617 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g0167 Mtr-Chr7 2765446 2774605 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g0167 366 685 Eukaryotic Initiation Factors Gene Family AT4G34110 23.770 5.82e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g0167 K13161 - gmx:100806658 559.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0117 8 1356875 1363310 Mtr7g0167 7 2765446 2774605 PCT