Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g0165 ATGGACATAACCTTAACCCCAACACCAACACCTACACCAGCACCAACATCAACAACATCAATAGCACCAACCATATTAACAGCATCTACAACAACCTTAACTAAATCACCAGAACAACAACATGAAACTGAAACACCCACAACAAAATTCACAACCTCAACAACCCCAAAAATCTCACCTTTTTCAAATGGTGTTCTCAAACGTTTCCACCACCACCACCACCACTTCAACCACCACAACAACCATCAACCTACCATAACCTACAAAGAATGTCTCAAAAACCATGCAGCAAACCTAGGTGGTCATGCCCTAGATGGCTGTGGTGAATTCATGACATCACCAACAGCAACACCAACCGACCCAACATCCTTAAAATGTGCTGCTTGTGGCTGCCACCGTAACTTCCACCGCCGTGAACCAGAAGAGCCACCACTCACAACCACTCATGTCATTGAATATCAACCTCACCACCGTCATCAACCACTTCCACCACCACCGTTCTCTCACCGGAGCCCAAATTCCTCTTCACCACCACCGATCTCATCTTCCTACTACCCCTCCGCCCCTCACATGCTTCTTGCTCTCTCCGCCGCCTTACCGGAAAACGTTGCAGCTCCAAACCAAACCATGTTGATGAATTCTCACTCTAACAATTCAAGAAAGCGTTTCAGGACAAAGTTTACACAAGATCAGAAGGATAAGATGCTGAAATTTGCTGAGAAAGTTGGGTGGAAGATGCAGAAAAAAGATGATGAATTTGTTCATGAGTTTTGTAATGAAATTGGTGTTGATCGTAGTGTTCTTAAGGTTTGGATGCATAACAACAAGAACACTTTAGCTAAACGAGAAAACATTAACACTAACAATGATATTAATGATGGTGTTAAGAGTTTTCAGCTACCTCTTGAAGATGAAGAACACAAGAATAATGTTGAGATTCATGGTCTTAATCACAATCATTATCAGAATGAAGGTGGAGTTGTTGGAGTAACTGTTCGTGCTAATGGTTCATCATCTTCTTCTTAA 1026 0.424 MDITLTPTPTPTPAPTSTTSIAPTILTASTTTLTKSPEQQHETETPTTKFTTSTTPKISPFSNGVLKRFHHHHHHFNHHNNHQPTITYKECLKNHAANLGGHALDGCGEFMTSPTATPTDPTSLKCAACGCHRNFHRREPEEPPLTTTHVIEYQPHHRHQPLPPPPFSHRSPNSSSPPPISSSYYPSAPHMLLALSAALPENVAAPNQTMLMNSHSNNSRKRFRTKFTQDQKDKMLKFAEKVGWKMQKKDDEFVHEFCNEIGVDRSVLKVWMHNNKNTLAKRENINTNNDINDGVKSFQLPLEDEEHKNNVEIHGLNHNHYQNEGGVVGVTVRANGSSSSS* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g0165 341 SUPERFAMILY Homeodomain-like 212 281 IPR009057 -
Mtr7g0165 341 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 88 139 IPR006456 -
Mtr7g0165 341 MobiDBLite consensus disorder prediction 1 58 - -
Mtr7g0165 341 MobiDBLite consensus disorder prediction 17 58 - -
Mtr7g0165 341 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 1 297 - -
Mtr7g0165 341 MobiDBLite consensus disorder prediction 158 173 - -
Mtr7g0165 341 MobiDBLite consensus disorder prediction 155 182 - -
Mtr7g0165 341 PANTHER HOMEOBOX DOMAIN, ZF-HD CLASS PROTEIN 1 297 - -
Mtr7g0165 341 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 220 277 IPR006455 -
Mtr7g0165 341 Gene3D - 207 281 - -
Mtr7g0165 341 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 87 139 IPR006456 -
Mtr7g0165 341 Pfam ZF-HD protein dimerisation region 86 140 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g0165 Mtr-Chr7 2725897 2727442 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g0165 25 284 ZF-HD Transcription Factor Family AT5G15210 48.905 4.04e-69 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Mtr7g0165 ZF-HD_dimer 1.4e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g0165 - - gmx:100786999 306.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g0298 6 3614131 3615689 Mtr7g0165 7 2725897 2727442 PCT