Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g0164 ATGGGAAGACCACCTTGTTGTGACAAAGAAGGTGTTAAAAAAGGACCATGGACTCCTGAAGAAGATATCATACTTGTTACTTATATACAAGAACATGGTCCTGGAAATTGGAGGGCTGTTCCAACCAAGACAGGGTTGTCAAGATGCAGCAAAAGTTGCAGACTTAGATGGACTAATTACCTAAGGCCAGGAATCAAACGGGGTAACTTCACTGAACAAGAGGAGAAGATGATTATCCATCTTCAAGATCTTTTAGGAAATAGATGGGCTGCAATAGCATCATACCTTCCACAAAGAACAGATAATGACATAAAAAACTATTGGAATACTCATTTGAAAAAGAAGCTAAAGAAATCACAAACAGGTAATAATGCTGAATGCATTAATTTTGAAGAAGAAAAATTTTCAGCATCTCAAAGAATTCCAAGAGGTCAATGGGAAAGAAGACTTCAAACAGATATTCAAATGGCCAAAAAAGCACTTAATGAAGCACTTTCACCACAAAAATTATCTCCTAACTTTTCTACTTCAAACCCTACAAATAGTAACTCATTTTCTTCCACTAAAGAACCAGGTCAATCGTTTTGCTATGCTTCAAGTGCAGATAACATAGCGCGTTTATTAAAGGGTTGGATGAAAAATCCGATTAAATCATCGGTAAGTACTAATTCAGTTGTGACACAAAATTCCTTCAACAACTTTGATTCTGCTTCTAGTAGTGGAACAAAGGGTGAAATATTGTCTGAAACATTTGAATCTTTGTTTGGTTTTGAGCCTTTAGAGTCTTTGGAGTCATCGAATTCTGAATTTTCTCATCAGTCTTTGTCACCAGACGCAACGATTTTACAAGATGAAAGTAAGCCTGATGTTGGTTCAGAAACAATGCCCTTTTCTTTGCTTGAGAAATGGCTTCTTGATGAAGCAAGTTGTCCTGAAAAAGTATTAGGTTGTGGTGGTGATCATGCTCAAGTTTTCTAA 978 0.365 MGRPPCCDKEGVKKGPWTPEEDIILVTYIQEHGPGNWRAVPTKTGLSRCSKSCRLRWTNYLRPGIKRGNFTEQEEKMIIHLQDLLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLKKSQTGNNAECINFEEEKFSASQRIPRGQWERRLQTDIQMAKKALNEALSPQKLSPNFSTSNPTNSNSFSSTKEPGQSFCYASSADNIARLLKGWMKNPIKSSVSTNSVVTQNSFNNFDSASSSGTKGEILSETFESLFGFEPLESLESSNSEFSHQSLSPDATILQDESKPDVGSETMPFSLLEKWLLDEASCPEKVLGCGGDHAQVF* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g0164 325 MobiDBLite consensus disorder prediction 266 290 - -
Mtr7g0164 325 MobiDBLite consensus disorder prediction 167 192 - -
Mtr7g0164 325 CDD SANT 69 112 IPR001005 -
Mtr7g0164 325 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 316 - -
Mtr7g0164 325 Gene3D - 68 140 - -
Mtr7g0164 325 SMART sant 13 63 IPR001005 -
Mtr7g0164 325 SMART sant 66 114 IPR001005 -
Mtr7g0164 325 CDD SANT 16 61 IPR001005 -
Mtr7g0164 325 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Mtr7g0164 325 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mtr7g0164 325 PANTHER TRANSCRIPTION FACTOR MYB-HB-LIKE FAMILY-RELATED 1 316 - -
Mtr7g0164 325 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Mtr7g0164 325 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Mtr7g0164 325 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mtr7g0164 325 Gene3D - 13 66 - -
Mtr7g0164 325 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mtr7g0164 325 MobiDBLite consensus disorder prediction 266 281 - -
Mtr7g0164 325 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g0164 Mtr-Chr7 2692251 2694773 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g0164 1 309 MYB Transcription Factor Family AT5G62470 52.616 1.02e-104 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mtr7g0164 Myb_DNA-binding 1.2e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g0164 K09422 - gmx:778080 457.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g0296 6 3546411 3548806 Mtr7g0164 7 2692251 2694773 PCT