Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g0158 ATGGCATTCCCACCACCTCATAGTTTCATGTTTAACCCTCATGAAGATCATGATCAACTCCCTTCAACTTCTCTCAACACCTTCCCTTCTTTTCCACCTCAACACTTTCAACAAGGTGCGCCTTTTTTGTTGAAGAAATCAATGTCATTTTCGGGCATTGAGAACAAGTGTCATGATCATCATGAAGTGCATGGAGATGATGAGTTATCTGATGATGGATTCCAAAGTGGAGAGAAGAAGAAGATCAGACTGAATTTGGATCAAGTGCAGGCCCTTGAGAAGAGCTTTGAATTTGGGAACAAGCTTGATCCAGAAAGAAAAGTGCAACTTGCTAAGGCTTTAGGGTTGCAGCCTAGACAAATTGCTATATGGTTTCAGAATAGAAGAGCAAGATGCAAAACAAAGCAACTTGAGAATGAATATGAAGTCCTCAAGAAGAAATTTGAAGCTGTCAAGGATGAAAATGATGCACTTAAAGTTCATAATCAGAAACTACAAGGAGAGTTAGAAGCATTAAAAAGCAAGGATTGGTGCGAAGGTGGAACAAAATACCTAATGAAAGAAACTGAGGGTTCTTGGAGCAATGGAAGTGATAATAGCTTAAACATTAATTTAGATCTCTCAAGAACACAAGCTTTGAACAGTTCTGTTTCTTCACAGAATGGTAGAAACCTAATTAGCCTTCTACCAACTTCATTAAATCCAAACAACATACCCCAACTTCTTCAATTCACATCAAGACCAGATATTCAAGATGAAAACTTCAGCAGCATGTTTCACAACATTGATGAGCATCAGAACCTCTGGCCTTGGGCATAG 819 0.3883 MAFPPPHSFMFNPHEDHDQLPSTSLNTFPSFPPQHFQQGAPFLLKKSMSFSGIENKCHDHHEVHGDDELSDDGFQSGEKKKIRLNLDQVQALEKSFEFGNKLDPERKVQLAKALGLQPRQIAIWFQNRRARCKTKQLENEYEVLKKKFEAVKDENDALKVHNQKLQGELEALKSKDWCEGGTKYLMKETEGSWSNGSDNSLNINLDLSRTQALNSSVSSQNGRNLISLLPTSLNPNNIPQLLQFTSRPDIQDENFSSMFHNIDEHQNLWPWA* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g0158 272 Coils Coil 127 175 - -
Mtr7g0158 272 Pfam Homeobox associated leucine zipper 135 175 IPR003106 GO:0006355|GO:0043565
Mtr7g0158 272 SMART HOX_1 77 139 IPR001356 GO:0003677
Mtr7g0158 272 MobiDBLite consensus disorder prediction 17 31 - -
Mtr7g0158 272 ProSiteProfiles 'Homeobox' domain profile. 75 135 IPR001356 GO:0003677
Mtr7g0158 272 SUPERFAMILY Homeodomain-like 65 137 IPR009057 -
Mtr7g0158 272 ProSitePatterns 'Homeobox' domain signature. 110 133 IPR017970 GO:0000981|GO:0006355
Mtr7g0158 272 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 1 272 IPR045224 GO:0003700
Mtr7g0158 272 PRINTS Lambda-repressor HTH signature 106 115 IPR000047 GO:0003677
Mtr7g0158 272 PRINTS Lambda-repressor HTH signature 115 131 IPR000047 GO:0003677
Mtr7g0158 272 PANTHER HOMEOBOX ASSOCIATED LEUCINE ZIPPER PROTEIN 1 272 - -
Mtr7g0158 272 MobiDBLite consensus disorder prediction 1 31 - -
Mtr7g0158 272 Pfam Homeodomain 79 133 IPR001356 GO:0003677
Mtr7g0158 272 Gene3D - 46 140 - -
Mtr7g0158 272 CDD homeodomain 79 136 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g0158 Mtr-Chr7 2572785 2575871 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g0158 1 272 Homeobox Transcription Factor Family AT3G01220 44.444 6.92e-64 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mtr7g0158 Homeodomain 2e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g0158 K09338 - gmx:100797920 379.407
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g0158 7 2572785 2575871 Mtr7g0158 7 2572785 2575871 ECH
Mtr6g0275 6 3280058 3283567 Mtr7g0158 7 2572785 2575871 PCT