Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g0127 ATGGCAATGTTGATAGAAAACGAAGTCATGTGTTTAGGAAAGAGTCAAAGATCCATGGATGGAAAAGAGGTAAAAGGAGCACGTCGTGTTAAGAGACAAAGAAGAGATGCTATTGTACCAAAAATAGGTGATGATGCTAACAAGATGGCACAGAAACAAGTTGGAGAAAATTCTACAACTAACACTTCAAAGAGAAGCTCAAGATTTCGTGGTGTTAGCAGGCATAGATGGACGGGTCGATTTGAAGCTCACTTGTGGGACAAGCTTTCTTGGAACACAACACAAAAGAAGAAAGGGAAGCAAGTTTACCTTGGGGCTTATGATGAAGAAGAATCTGCTGCAAGAGCATATGATTTAGCTGCACTTAAGTATTGGGGAACATCAACTTTCACTAATTTTCCGATATCAGATTATGATAAAGAGATAGAGATAATGAATACTATGACCAAAGAGGAGTACTTGGCCACATTAAGAAGAAAAAGCAGTGGCTTTTCAAGAGGTGTCTCAAAGTATAGAGGTGTTGCAAGGCACCATCATAATGGTAGATGGGAAGCAAGGATAGGGAGAGTTTTTGGAAACAAATATCTCTATCTTGGAACCTATAGTACACAAGAAGAAGCTGCACGTGCTTATGATATAGCTGCAATTGAGTACAGAGGAATTCATGCTGTGACCAATTTTGAATTGAGTAGCTACATAAAATGGTTAAAGCCAGAAACTACTACAGAAGAAAATCATGAATCACAAATATTACAAAAAGAGTCTCGAACATTAGCACCCCCTAATAACTCTACTCTATTGCAAGAATCAAAGTTATTAGCCCTTCAAAAGAGCTTTTTCATTCCAAATGACCTGAATTCAACTGAAAAGCAAGAATCATCATTTGAAAACAAAAACTATCATTTCTTGAGCAACAAGTCAACTTCTCCAACCGCGCTTAGCCTTCTCCTTCGCTCTTCGTTGTTTAGAGAATTACTTGAAAAGAATTCAAATGTATCTGAGGATGAAGTTACAAAAGAGCAACAACAACAACAAATAACTAGTGATGATGAACTTGGAGGAATCTTCTATGATGGTATTGACAATATTTCATTTGACTTTGATCCCAACAGCTGCAACATAGAATTGCAAGAAAGAGACTTGCATTCAATATCTTGTTTATATCAATACTTAAATTTTGGACAATAA 1188 0.367 MAMLIENEVMCLGKSQRSMDGKEVKGARRVKRQRRDAIVPKIGDDANKMAQKQVGENSTTNTSKRSSRFRGVSRHRWTGRFEAHLWDKLSWNTTQKKKGKQVYLGAYDEEESAARAYDLAALKYWGTSTFTNFPISDYDKEIEIMNTMTKEEYLATLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEYRGIHAVTNFELSSYIKWLKPETTTEENHESQILQKESRTLAPPNNSTLLQESKLLALQKSFFIPNDLNSTEKQESSFENKNYHFLSNKSTSPTALSLLLRSSLFRELLEKNSNVSEDEVTKEQQQQQITSDDELGGIFYDGIDNISFDFDPNSCNIELQERDLHSISCLYQYLNFGQ* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g0127 395 Pfam AP2 domain 169 220 IPR001471 GO:0003700|GO:0006355
Mtr7g0127 395 Pfam AP2 domain 67 126 IPR001471 GO:0003700|GO:0006355
Mtr7g0127 395 SMART rav1_2 170 234 IPR001471 GO:0003700|GO:0006355
Mtr7g0127 395 SMART rav1_2 68 140 IPR001471 GO:0003700|GO:0006355
Mtr7g0127 395 Coils Coil 323 343 - -
Mtr7g0127 395 MobiDBLite consensus disorder prediction 51 67 - -
Mtr7g0127 395 PRINTS Ethylene responsive element binding protein signature 69 80 IPR001471 GO:0003700|GO:0006355
Mtr7g0127 395 PRINTS Ethylene responsive element binding protein signature 210 230 IPR001471 GO:0003700|GO:0006355
Mtr7g0127 395 SUPERFAMILY DNA-binding domain 67 136 IPR016177 GO:0003677
Mtr7g0127 395 SUPERFAMILY DNA-binding domain 169 229 IPR016177 GO:0003677
Mtr7g0127 395 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 10 369 - -
Mtr7g0127 395 MobiDBLite consensus disorder prediction 43 71 - -
Mtr7g0127 395 CDD AP2 67 136 IPR001471 GO:0003700|GO:0006355
Mtr7g0127 395 CDD AP2 169 230 IPR001471 GO:0003700|GO:0006355
Mtr7g0127 395 Gene3D AP2/ERF domain 169 230 IPR036955 GO:0003700|GO:0006355
Mtr7g0127 395 Gene3D AP2/ERF domain 67 136 IPR036955 GO:0003700|GO:0006355
Mtr7g0127 395 ProSiteProfiles AP2/ERF domain profile. 68 134 IPR001471 GO:0003700|GO:0006355
Mtr7g0127 395 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 10 369 - -
Mtr7g0127 395 ProSiteProfiles AP2/ERF domain profile. 170 228 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g0127 Mtr-Chr7 2282309 2284694 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g0127 64 232 AP2-EREBP Transcription Factor Family AT5G57390 69.231 1.27e-83 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Mtr7g0127 AP2 3.9e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g0127 - - gmx:100792612 515.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g0127 7 2282309 2284694 Mtr7g0127 7 2282309 2284694 ECH