Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g0096 ATGCTCTTTTTTCTTATTTGGGATTTGATTGTGGGAATTCAATCTGCTGCTACTGTGACATCTCATCAACTTCAAATGGAAGCAAATGCTATATTGAATAGTGGATGGGTGAACATAGACAATATGGTTCCTGACTACAATATATCTAATCGTTGTAATTGGCCTGATATAACTTGCAACGAAGTAGGAAGCATAAAAGCAATCAACATAGACAATATGATGCCTCGCTATACAGGGACGGTGCTATTTGAAAGACTCAACTTGTCTACTTTTCGCAATTTAGAAAGTCTTGTTGTCATTGGACATCATCTTCCAAAGACAATTTTAAAAGAAATTTGTCTTCTCTCCAAGCTCACTCATCTTCAACTATCTAGGAATTATCTTGAAAGTCAGGTACCTCATTCACTGGGAAATCTCTCAAAGCTCACTCATCTTAATCTGTCTAACAATATTCTTGTAGGTAAGCTACCTCCTTCAATAGAAAATCTCTCCAAGCTCACTCATCTTGATTTGTCTGCCAATTCTCTTAAAGGCCAGGTACCTCCTTCAATAGAAAACCTTAGACAATTAAACTACCTAAACATCTCTTTTAACTTTATTCAAGGTTCCATCCCTCCTGAATTGTGGTTGCTAAAAAATCTCACTTGCTTATATCTATCTAACAATAGATTCAAAGGTGAGATACCTTCTTCCCTAGGAAATCTCAAACAATTACAGGTGTTAGACATCTCTCACAACAACATTCAAGGTTCCATTCCTCTTGAGTTGGGGTTCTTGGAATATCTCTCTTCATTAGATCTATCTCACAATAGACTTAATGGTAACCTGCCTATTTTTCTTTCAAATCTTACACAATTACAATACCTTGACATTTCCCATAATTTACTCATCGGTACGCTTCCTTCCAATTGGTTTCCATTTAATAATTATCTACTTTCCATGGACCTCAGTCACAACCTCATTAGTGGTAAAATCCCTTCTCATATTGAAGATGTTTATTACAAACTTAATTTAAGCAATAATAATCTCTCTGGAACAATTCCCCAATCTCTCTGTAATTTCTATTATTATGTGGACATTTCATACAATTGTTTGGAGGATCCCATTCCAAATTGTCTTCAGCCAAGTAACAAGGAAAATAATAATCTCACTGTAATATCTTTTAACCAATTCCATCCTTGGCCAATACACAAGAAAAATAAAAAATTAAAGCACATTGTTGTCATTGTTCTTCCGATCCTTATTCTTCTAGTCCTAGTCTTCTCACTTCTCATATGCTTGAATCTTCATCATAATTTTCGTAACAAGTTGGATGGAAACTCAACAAAAACAAAGAATGGAGATATGTTTTGTATATGGAATTATGATGGGAAGATAGCATATGATGACATCGTTAGAGCAACGGAAGACTTCGACATGAGATATTGCATTGGAACAGGAGCATATGGAAGTGTTTACAAGGCACAATTACCAAGTGGCAAGGTTGTTGCCTTAAAGAAACTTCACGGCTATGAAGCAGAGGTTCCATCTTTTGATGAGAGTTTCAGAAATGAAGTGAAAATATTATCAGAAATAAAGCACCGACATATTGTGAAGCTTTATGGATTCTGCTTGCACAAAAGAATCATGTTTTTGATCTATCAATACATGGAGAAAGGAAGCTTGTTCTCTGTCTTGTATGATGATGTAGAAGCCGTGGAATTCAAGTGGAGAAAAAGGGTTAACACTATTAAAGGAGTTGCATTTGCTCTTTCATATCTTCATCATGATTGCACTGCTCCAATCATGCATAGAGATGTATCTAGTAGCAATATATTGCTAAACTATGAGTGGCAGGCTAGTGTTTGTGACTTTGGCACAGCTCGACTCCTTCAATATAATTCATCCAATCGAACTATAGTTGCTGGAACTATTGGATATATAGCTCCTGAGCTTGCTTATACAATGGCTGTGAATGAAAAGTGTGATGTATATAGTTTTGGTGTAGTGGCACTTGAAGCTTTAGTTGGAAGGCACCCTGAGGATATATTGTCATCACTTCAATCAAATTCGACACAAAGTGTCAAACTATGTCAAGTATTAGACCAGCGTCTTCCACTTCCAAATAACGATGTAGTTATACGTGACATAATTCATGTTGCCGTGGTTGCATTTGCATGCTTAAATATCAATCCTCGTTCTCGACCAACAATGAAACGTGTGTCACAAAGTTTTGTCACGGAGCTCACACCATTAAGCATTCCTTTGAGTGAAATTTCAGTGCAACAACTCATGAGTCAAGAACTGAAAGGATTATTTTATATTGGGAACCCCTGA 2316 0.3627 MLFFLIWDLIVGIQSAATVTSHQLQMEANAILNSGWVNIDNMVPDYNISNRCNWPDITCNEVGSIKAINIDNMMPRYTGTVLFERLNLSTFRNLESLVVIGHHLPKTILKEICLLSKLTHLQLSRNYLESQVPHSLGNLSKLTHLNLSNNILVGKLPPSIENLSKLTHLDLSANSLKGQVPPSIENLRQLNYLNISFNFIQGSIPPELWLLKNLTCLYLSNNRFKGEIPSSLGNLKQLQVLDISHNNIQGSIPLELGFLEYLSSLDLSHNRLNGNLPIFLSNLTQLQYLDISHNLLIGTLPSNWFPFNNYLLSMDLSHNLISGKIPSHIEDVYYKLNLSNNNLSGTIPQSLCNFYYYVDISYNCLEDPIPNCLQPSNKENNNLTVISFNQFHPWPIHKKNKKLKHIVVIVLPILILLVLVFSLLICLNLHHNFRNKLDGNSTKTKNGDMFCIWNYDGKIAYDDIVRATEDFDMRYCIGTGAYGSVYKAQLPSGKVVALKKLHGYEAEVPSFDESFRNEVKILSEIKHRHIVKLYGFCLHKRIMFLIYQYMEKGSLFSVLYDDVEAVEFKWRKRVNTIKGVAFALSYLHHDCTAPIMHRDVSSSNILLNYEWQASVCDFGTARLLQYNSSNRTIVAGTIGYIAPELAYTMAVNEKCDVYSFGVVALEALVGRHPEDILSSLQSNSTQSVKLCQVLDQRLPLPNNDVVIRDIIHVAVVAFACLNINPRSRPTMKRVSQSFVTELTPLSIPLSEISVQQLMSQELKGLFYIGNP* 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g0096 771 PRINTS Leucine-rich repeat signature 262 275 - -
Mtr7g0096 771 PRINTS Leucine-rich repeat signature 283 296 - -
Mtr7g0096 771 Gene3D Phosphorylase Kinase; domain 1 434 549 - -
Mtr7g0096 771 Pfam Leucine rich repeat 213 272 IPR001611 GO:0005515
Mtr7g0096 771 SMART LRR_sd22_2 163 189 - -
Mtr7g0096 771 SMART LRR_sd22_2 115 141 - -
Mtr7g0096 771 SMART LRR_sd22_2 235 256 - -
Mtr7g0096 771 SMART LRR_sd22_2 283 309 - -
Mtr7g0096 771 ProSiteProfiles Protein kinase domain profile. 471 739 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr7g0096 771 ProSiteProfiles Leucine-rich repeat profile. 237 260 IPR001611 GO:0005515
Mtr7g0096 771 ProSitePatterns Protein kinases ATP-binding region signature. 477 499 IPR017441 GO:0005524
Mtr7g0096 771 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 281 764 - -
Mtr7g0096 771 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 132 288 - -
Mtr7g0096 771 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 19 178 - -
Mtr7g0096 771 SUPERFAMILY Protein kinase-like (PK-like) 450 736 IPR011009 -
Mtr7g0096 771 Gene3D Ribonuclease Inhibitor 179 276 IPR032675 -
Mtr7g0096 771 Gene3D Ribonuclease Inhibitor 22 178 IPR032675 -
Mtr7g0096 771 Gene3D Ribonuclease Inhibitor 277 393 IPR032675 -
Mtr7g0096 771 Pfam Protein kinase domain 477 736 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr7g0096 771 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 19 178 - -
Mtr7g0096 771 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 132 288 - -
Mtr7g0096 771 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 281 764 - -
Mtr7g0096 771 ProSitePatterns Tyrosine protein kinases specific active-site signature. 595 607 IPR008266 GO:0004672|GO:0006468
Mtr7g0096 771 SUPERFAMILY RNI-like 88 394 - -
Mtr7g0096 771 Pfam Leucine Rich Repeat 141 163 IPR001611 GO:0005515
Mtr7g0096 771 Pfam Leucine Rich Repeat 285 305 IPR001611 GO:0005515
Mtr7g0096 771 Pfam Leucine Rich Repeat 165 187 IPR001611 GO:0005515
Mtr7g0096 771 SMART LRR_typ_2 163 187 IPR003591 -
Mtr7g0096 771 SMART LRR_typ_2 211 234 IPR003591 -
Mtr7g0096 771 SMART LRR_typ_2 115 139 IPR003591 -
Mtr7g0096 771 SMART LRR_typ_2 283 307 IPR003591 -
Mtr7g0096 771 SMART LRR_typ_2 235 259 IPR003591 -
Mtr7g0096 771 Gene3D Transferase(Phosphotransferase) domain 1 550 743 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g0096 Mtr-Chr7 1673526 1676171 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g0096 104 643 Receptor kinase-like Gene Family AT4G08850 38.750 6.15e-115 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mtr7g0096 Pkinase 2.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g0096 - - mtr:MTR_8g047210 983.786