Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g0093 ATGTTGATTGCCTTTCTTATTATTTGCAGTTTGATTGTGGGAACTCAATCCGCTGCCACTGTGACATCTCAACTTCAAATGGAAGCAAATGCTATATCGAATAGTGGATGGTGGAACACCTCTGATGCACGATTCAATATCTCTGATCGTTGTAATTGGCATGATATATGTTGCAACGATGATGGAAGCATAAAAGCTATCAACATAGACCCTTGGAGATCTCCACTTGCAACACCCAACTTGTCTACTCTCAACTATTCTACTTTTAACAATTTAGAAAGACTTGTTATAAGGTCAGCTGAACTAGAAGGGACTATGCCAAATGAAATTGGTCATCTCTCTAAGCTCACTTATCTTGATCTGTCTAACAATTATATTGAAGGTCAGGTACCTCATTCACTAGGAAATCTCTCCATGCTCACTCATCTTGATCTGTCTGGCATTTATCTTCTAGGTCCAGTACCTACTTCACTAGGACATCTCTCCAAGCTCACTCATCTTGATCTATCGCGCAATCATTTTGAAGGTCGGATACCTCCTTCACTAGGAAATCTCTCCAAGCTCACTCATCTTGATTTGTCTGCCAATTATCTTAAAGGTCTATCTAACAATAGTTTCAAAGGTGAGATACCTTCTTCACTAGGAAATCTCAAACAATTACAGAAGCTAGACATCTCTCACAACTACATTGAAGGTTATATTCCTTTTGAGTTGCGGTTCCTCAAAAATCTAACTAGATTAGACATCTCTCACAACAACCTTAAAGGTTCCATTCCTCATGAGTTGGGGTTCTTGGAATATCTCTCTTCATTAGATCTATCTCACAATAGACTTAATGGTAACCTGCCTACTTTTCAAACATATCTTACTGATTATGTAATTTACGTAGACTTCCGTCACAACCTCATTAGTGGTCAAATCCCTTCTCATATTGGATTTTATTGGTCACTTAATTTAAGCAATAATAATCTCACTGGAACAATTCCCCAATCTCTCTGTAATTTATTCAATTATTATGTGGACATTTCATACAATTGTTTGGAGGGTCCCATTCCAAATTGTCTTGATCATATGGAAAATTCTGATGTATGTTCATTTAACAAATTCCAGCCTTGGTCACCACACAAGAAAAATAATAAATTAAAGCACATTGTTGTCATTGTTCTTCCGATCCTTATTATTCTAGTCATAGTCTTCTTACTTCTCATATGTTTAAATCGTCATCATCATTCTTCTGAGAAGTTGCATGGAAACTCAACAAAAACAAAGAATGGAGATATGTTTTGTATATGGAATTATGATGGGAAAATAGCATATGATGACATCATCAAAGCAACAGAAGACTTTGACATGAGATATTGCATTGGAACAGGAGCATATGGAAGTGTTTACAAGGCACAATTACCATGTGGCAAGGTTGTTGCCTTAAAGAAACTTCACGGCTATGAAGCTGAGGTTCCATCTTTTGATGAGAGTTTCAGAAATGAAGTGAGAATATTATCAGAAATAAAGCACAAACATATCGTGAAGCTTTATGGATTCTGCTTGCACAAAAGAATCATGTTTTTGATATATCAATACATGGAGAAAGGAAGCTTGTTCTCTGTCTTGTATGATGATGTGGAAGCTGTGGAATTCAATTGGAGAAAAAGGGTTAACACTGTTAAAGGAGTTGCATTTGCTCTATCTTATCTTCATCATGATTGCAATGCTCCAATAGTGCATAGAGATGTATCTAGTAGCAATATATTTGTTAACTCTGAGTGGCAGGCTAGTGTTTGTGACTTTGGCACAGCTCGACTCCTTCAATATGATTCATCCAATCGAACTATAGTTGCTGGAACTATTGGATATATTGCTCCTGAGCTTGCCTATACTATGGTTGTGAATGAAAAGTGTGATGCATATAGTTTTGGTGTTGTAGCACTTGAAACTTTAGTTGGAAGGCATCCTGGAGATTTACTGTCATCACTTCAGTCAACATCGACACGAAGTGTCAAACTATGTCAAGTATTAGACCAGCGTCTTCCACTTCCAAATAATGACATAGTTATACGTGACATAATTCATGTTGTCGTGGTTGCATTTGCATGCTTAAATATCAATCCTCATTCTCGACCAACAATGAAACGTGTGTCACAAAGTTTTGTCACTGAACTTACACCATTAAGCATTCCTTTGAGTGAAATTTCAGTGCAACAACTAATGAGTGAAGAACTCAATGCATTATTTTATATTGAGAACCCTTGA 2250 0.3676 MLIAFLIICSLIVGTQSAATVTSQLQMEANAISNSGWWNTSDARFNISDRCNWHDICCNDDGSIKAINIDPWRSPLATPNLSTLNYSTFNNLERLVIRSAELEGTMPNEIGHLSKLTYLDLSNNYIEGQVPHSLGNLSMLTHLDLSGIYLLGPVPTSLGHLSKLTHLDLSRNHFEGRIPPSLGNLSKLTHLDLSANYLKGLSNNSFKGEIPSSLGNLKQLQKLDISHNYIEGYIPFELRFLKNLTRLDISHNNLKGSIPHELGFLEYLSSLDLSHNRLNGNLPTFQTYLTDYVIYVDFRHNLISGQIPSHIGFYWSLNLSNNNLTGTIPQSLCNLFNYYVDISYNCLEGPIPNCLDHMENSDVCSFNKFQPWSPHKKNNKLKHIVVIVLPILIILVIVFLLLICLNRHHHSSEKLHGNSTKTKNGDMFCIWNYDGKIAYDDIIKATEDFDMRYCIGTGAYGSVYKAQLPCGKVVALKKLHGYEAEVPSFDESFRNEVRILSEIKHKHIVKLYGFCLHKRIMFLIYQYMEKGSLFSVLYDDVEAVEFNWRKRVNTVKGVAFALSYLHHDCNAPIVHRDVSSSNIFVNSEWQASVCDFGTARLLQYDSSNRTIVAGTIGYIAPELAYTMVVNEKCDAYSFGVVALETLVGRHPGDLLSSLQSTSTRSVKLCQVLDQRLPLPNNDIVIRDIIHVVVVAFACLNINPHSRPTMKRVSQSFVTELTPLSIPLSEISVQQLMSEELNALFYIENP* 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g0093 749 SUPERFAMILY Protein kinase-like (PK-like) 428 714 IPR011009 -
Mtr7g0093 749 Gene3D Ribonuclease Inhibitor 201 389 IPR032675 -
Mtr7g0093 749 SUPERFAMILY L domain-like 78 310 - -
Mtr7g0093 749 Gene3D Phosphorylase Kinase; domain 1 409 527 - -
Mtr7g0093 749 PRINTS Leucine-rich repeat signature 188 201 - -
Mtr7g0093 749 PRINTS Leucine-rich repeat signature 265 278 - -
Mtr7g0093 749 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 20 267 - -
Mtr7g0093 749 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 265 742 - -
Mtr7g0093 749 Gene3D Ribonuclease Inhibitor 19 200 IPR032675 -
Mtr7g0093 749 SMART LRR_typ_2 161 184 IPR003591 -
Mtr7g0093 749 SMART LRR_typ_2 185 208 IPR003591 -
Mtr7g0093 749 SMART LRR_typ_2 113 137 IPR003591 -
Mtr7g0093 749 SMART LRR_typ_2 241 265 IPR003591 -
Mtr7g0093 749 Pfam Leucine Rich Repeat 316 335 IPR001611 GO:0005515
Mtr7g0093 749 Pfam Leucine Rich Repeat 163 185 IPR001611 GO:0005515
Mtr7g0093 749 Pfam Leucine Rich Repeat 187 207 IPR001611 GO:0005515
Mtr7g0093 749 Gene3D Transferase(Phosphotransferase) domain 1 528 721 - -
Mtr7g0093 749 ProSitePatterns Tyrosine protein kinases specific active-site signature. 573 585 IPR008266 GO:0004672|GO:0006468
Mtr7g0093 749 ProSitePatterns Protein kinases ATP-binding region signature. 455 477 IPR017441 GO:0005524
Mtr7g0093 749 ProSiteProfiles Protein kinase domain profile. 449 717 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr7g0093 749 Pfam Protein kinase domain 455 714 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr7g0093 749 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 20 267 - -
Mtr7g0093 749 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 265 742 - -
Mtr7g0093 749 SMART LRR_sd22_2 113 139 - -
Mtr7g0093 749 SMART LRR_sd22_2 217 238 - -
Mtr7g0093 749 SMART LRR_sd22_2 185 206 - -
Mtr7g0093 749 SMART LRR_sd22_2 241 273 - -
Mtr7g0093 749 ProSiteProfiles Leucine-rich repeat profile. 187 208 IPR001611 GO:0005515
Mtr7g0093 749 Pfam Leucine rich repeat 219 278 IPR001611 GO:0005515
Mtr7g0093 749 Pfam Leucine rich repeat 91 147 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g0093 Mtr-Chr7 1612425 1615000 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g0093 92 621 Receptor kinase-like Gene Family AT4G08850 37.478 1.12e-111 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mtr7g0093 Pkinase 9.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g0093 - - mtr:MTR_8g047230 898.656