Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g0071 ATGCGGATGAGTTGCAACGGTTGTAGAGTACTAAGAAAAGGTTGCAGTGAAAACTGTAGCATAAGACCTTGTTTGCAATGGATCAAAAGCCCTGAATCACAGGCTAATGCCACCGTGTTTCTCGCCAAATTCTACGGTCGTGCTGGTCTCATGAACCTTGTTAACGCTGGTCCCGAACATCTTCGTCCAGCAATTTTTCGTTCGTTGTTGTACGAAGCATGTGGTCGAATAGTGAACCCAATTTACGGTTCAGTCGGTTTATTATGGTCCGGAAGCTGGCAGCTATGTCAAGCCGCGGTGGAAGCCGTTTTGAAAGGCGCACCGATCACGCCGATAACTTCGGAAGCAGCTGCTAACGGGAGGGGCCCACCACTCAAAGCCTATGACATCCGCCATGTGTCGAAGGAGGAAAACTCAGCCGCGTCGACTGAGTTGACTCAACAACGAGTCAAGCCTCGGTCGCGTAAGCGGTCGAGTTTAGCCAAGCTGAAAATACAAGAAGAGGAAAAGAGTAGTAATGATAACAAGGGAGTTGAATCCGGTTCAACTGAACCGACCGGTTCGGTTGAACCGGTTGAAGAGGTGATGAACCGGTCAGTGAGTCATGAGTCGTCGATTAGCCACCAGTCTGAGGCGGTTGCGGTGGTGGATGGAGAGAGTAAAGATAGCGAGAGTGAAACTTCGATGATCTTATTTAGAGATGAACCGGAGTTGGACCGAAAAATGAAGCCGGCTGACCGAACCGGTGAGAATGGAGAGGAAAAGGTTGGTTTGGAGCTGACTCTTGGGCTTGAACCGGTTTCACGTGTTTACCATGTGGTTCCTGTGAAGAAAAGAAGGGTTGTATTGAAGGATTGTGGTGTTGGCTCATGGAATGTGGAGTTGGGGCTTCAATATCCGGCTTAG 906 0.4934 MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLVNAGPEHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPITSEAAANGRGPPLKAYDIRHVSKEENSAASTELTQQRVKPRSRKRSSLAKLKIQEEEKSSNDNKGVESGSTEPTGSVEPVEEVMNRSVSHESSISHQSEAVAVVDGESKDSESETSMILFRDEPELDRKMKPADRTGENGEEKVGLELTLGLEPVSRVYHVVPVKKRRVVLKDCGVGSWNVELGLQYPA* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g0071 301 Pfam Lateral organ boundaries (LOB) domain 4 103 IPR004883 -
Mtr7g0071 301 PANTHER LOB DOMAIN-CONTAINING PROTEIN 40 1 294 - -
Mtr7g0071 301 MobiDBLite consensus disorder prediction 160 175 - -
Mtr7g0071 301 PIRSF AS2 1 297 IPR017414 -
Mtr7g0071 301 MobiDBLite consensus disorder prediction 215 229 - -
Mtr7g0071 301 MobiDBLite consensus disorder prediction 136 229 - -
Mtr7g0071 301 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 294 - -
Mtr7g0071 301 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g0071 Mtr-Chr7 1382326 1384029 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g0071 1 286 AS2 family AT3G02550 57.840 7.07e-114 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mtr7g0071 LOB 1.6e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g0071 - - lja:Lj1g3v3317390.1 412.149