Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g0065 ATGTGGATGCTCTTTTTTCCTATTTGCGGTTTGATTGTTGGAATTGAATCTGCTGCTACTGTGACATCTCATCAACTTCAAATGGAAGCAAATGCTATATTGAATAGTGGATGGTGGAATGTGTCTGATGCACGCTTCATTATTCGTGATCGTTGTAATTGGCAAGCCATAACTTGCAACGTGGCTGGAAGCATAAAAGAAATTGTCATATACAATGATGATTATGAAAAAGTTGCGTGGGGGAATGAATTTCAAACACGCAATTTGTCTACTCTCAACTTGTCCTGTTTCAACAATCTAGAAACACTTGTTATAAGCTCAGTTGAACTACATGGGACTATCCCTAAAGAAATTGGTCATCTCTCTAAGCTCACTTATCTTGATTTGTCAGGCAATTATCTTAATGGTGAGCTACCTCCTGAATTGTGGTTGCTAAAAAATCTCACTTTCTTATATCTATCTTACAATAAATTCAAAGGTGAGATACCTTCTTCCCTAGAAAATCTAAAACAATTAGAAGACCTTGACATCTCTTACAACAACCTTAAAGGTCAGCTACCTCCGGAATTGTGGTTGCTAAAAAATCTCACTTTCTTAGATCTATCTTACAATATGTTCAAAGGTGAGATACCTTCTTCCCTAGGAAATCTAACACAATTAGAGGACCTATACATCTCTAACAACTATATTGAAGGTCATATTCCTTTTGAGTTGGTGTTCCTGAAAAATATGATTACATTTGATCTATCTAACAATAGACTCACTGACCTTGATTTCTCTAGCAATTATCTTAAAGGTCAAGTAGGAAATCCCAAACAGTTACAACTATTAAACATCTCTCACAACAACATTCAAGGTTCCATTCCTCTTGAGTTGGGGTTCTTGAAGAATCTCACTATATTAGATCTATCTCACAATAGACTCAATGGAAACTTTCCTATTTTTGTTTCAAATCTTACACAATTACAATACCTTGACATTTCCCATAATTTCCTTATAGGTACGCTTCCTTCCAATTGGTTTTCATCTAATAATTATCTACTTTCCATGGACCTCAGTCACAACCTCATTAGTGGTAAAATCCCTTCTAATATTGGAAATTATTACACACTTATTTTAAGCAATAATAATCTCACTGGAACAATTCCCCAATCTCTCTGTAATGTCGATTATGTGGACATTTCATACAATTGTTTGGAGGGTCCCATTCCAAATTGTCTTCAGGATTATACAAAGAATAAGGGAGATAATAATCTCAATGGAGCAATTCCCCAATCTCATTGTAATCACTCTATAATGTCTTTCCACCAACTCCATCCTTGGCCAACACACAAGAAAAATATTAAATTAAAGCATATTGTTGTCATTGTTCTTCCGATCCTTATTATTCTAGTCCTAGTCTTCTCACTTCTCATATGCTTGTATCGTCATCATAATTCAACTAAGAAGTTGCATGCAAACTTAACAAAAACAAAGAATGGAGATATGTTTTGTATATGGAATTATGATGGGAAGATAGCATATGATGACATAATCAAAGCAACGGAAGACTTTGACATGAGATATTGCATTGGAACTGGAGCATATGGAAGTGTTTACAAGGCACAATTACCAAGTGGCAAGGTTGTTGCCTTAAAGAAACTTCACGGCTATGAAGTCGAGGTTCCATCTTTTGATGAGAGTTTCAAAAATGAAGTGAGAATATTATCAGAAATAAAGCACCGACATATTGTGAAGCTTTATGGATTCTGCTTGCACAAAAGAATCATGTTTTTGATCTATCAGTACATGGAGAAAGGAAGCCTGTTCTCTATCTTGTATGATGATGTAGAAGCCGTGGAATTCAATTGGAGAACAAGGGTTAACACTATTAAAGGAGTTGCATTTGCTCTTTCATATCTTCATCATGATTGCACTGCTCCAATCGTGCATAGAGATGTATCTAGTAGCAATATCTTGCTAAACTCTGAGTGGCAGGCCAGTGTCGCTGACTTTGGCACAGCTCGACTCCTTCAATATGATTCATCCAATCGAACAATAGTTGCTGGAACTATTGGATATATAGCTCCTGAGCTTGCTTATACAATGGCTGTGAATGAAAAGTGTGATGTATATAGTTTTGGTGTAGTGGCACTTGAAGCTTTAGTTGGAAGGCACCCTGAGGATATATTGTCATCACTTCAATCAAATTCGCCACAAAGTGTCAAACTATGTCAAGTATTAGACCAGCGTCTTCCACTTCCAAATAACGACGTAGTTATACGTGACATAATTCATGTTGCCGTGGTTGCATTTGCATGCTTAAATATCAATCCTCGTTCTCGACCAACAATGAAACGTGTCTCACAAAGTTTTGTCACGGAGCTCACACCATTAAGCATTCCTTTGAGTGAAATTTCAGTGCAACAACTCACGGGTCAAGAACTGAAAGGATTATTTTATATTGGGAACCCCTGA 2457 0.3655 MWMLFFPICGLIVGIESAATVTSHQLQMEANAILNSGWWNVSDARFIIRDRCNWQAITCNVAGSIKEIVIYNDDYEKVAWGNEFQTRNLSTLNLSCFNNLETLVISSVELHGTIPKEIGHLSKLTYLDLSGNYLNGELPPELWLLKNLTFLYLSYNKFKGEIPSSLENLKQLEDLDISYNNLKGQLPPELWLLKNLTFLDLSYNMFKGEIPSSLGNLTQLEDLYISNNYIEGHIPFELVFLKNMITFDLSNNRLTDLDFSSNYLKGQVGNPKQLQLLNISHNNIQGSIPLELGFLKNLTILDLSHNRLNGNFPIFVSNLTQLQYLDISHNFLIGTLPSNWFSSNNYLLSMDLSHNLISGKIPSNIGNYYTLILSNNNLTGTIPQSLCNVDYVDISYNCLEGPIPNCLQDYTKNKGDNNLNGAIPQSHCNHSIMSFHQLHPWPTHKKNIKLKHIVVIVLPILIILVLVFSLLICLYRHHNSTKKLHANLTKTKNGDMFCIWNYDGKIAYDDIIKATEDFDMRYCIGTGAYGSVYKAQLPSGKVVALKKLHGYEVEVPSFDESFKNEVRILSEIKHRHIVKLYGFCLHKRIMFLIYQYMEKGSLFSILYDDVEAVEFNWRTRVNTIKGVAFALSYLHHDCTAPIVHRDVSSSNILLNSEWQASVADFGTARLLQYDSSNRTIVAGTIGYIAPELAYTMAVNEKCDVYSFGVVALEALVGRHPEDILSSLQSNSPQSVKLCQVLDQRLPLPNNDVVIRDIIHVAVVAFACLNINPRSRPTMKRVSQSFVTELTPLSIPLSEISVQQLTGQELKGLFYIGNP* 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g0065 818 Pfam Protein kinase domain 524 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr7g0065 818 SMART LRR_typ_2 193 217 IPR003591 -
Mtr7g0065 818 SMART LRR_typ_2 319 343 IPR003591 -
Mtr7g0065 818 SMART LRR_typ_2 241 261 IPR003591 -
Mtr7g0065 818 SMART LRR_typ_2 121 145 IPR003591 -
Mtr7g0065 818 SMART LRR_typ_2 169 192 IPR003591 -
Mtr7g0065 818 SMART LRR_typ_2 295 317 IPR003591 -
Mtr7g0065 818 SUPERFAMILY Protein kinase-like (PK-like) 499 783 IPR011009 -
Mtr7g0065 818 Gene3D Transferase(Phosphotransferase) domain 1 597 790 - -
Mtr7g0065 818 Gene3D Phosphorylase Kinase; domain 1 478 596 - -
Mtr7g0065 818 Gene3D Ribonuclease Inhibitor 22 184 IPR032675 -
Mtr7g0065 818 Gene3D Ribonuclease Inhibitor 257 444 IPR032675 -
Mtr7g0065 818 SUPERFAMILY RNI-like 94 412 - -
Mtr7g0065 818 Pfam Leucine rich repeat 99 158 IPR001611 GO:0005515
Mtr7g0065 818 Pfam Leucine rich repeat 297 357 IPR001611 GO:0005515
Mtr7g0065 818 Gene3D Ribonuclease Inhibitor 185 256 IPR032675 -
Mtr7g0065 818 ProSitePatterns Tyrosine protein kinases specific active-site signature. 642 654 IPR008266 GO:0004672|GO:0006468
Mtr7g0065 818 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 21 255 - -
Mtr7g0065 818 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 254 324 - -
Mtr7g0065 818 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 317 811 - -
Mtr7g0065 818 SMART LRR_sd22_2 241 259 - -
Mtr7g0065 818 SMART LRR_sd22_2 193 219 - -
Mtr7g0065 818 SMART LRR_sd22_2 145 171 - -
Mtr7g0065 818 SMART LRR_sd22_2 295 321 - -
Mtr7g0065 818 SMART LRR_sd22_2 121 136 - -
Mtr7g0065 818 ProSiteProfiles Protein kinase domain profile. 518 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr7g0065 818 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 317 811 - -
Mtr7g0065 818 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 21 255 - -
Mtr7g0065 818 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 254 324 - -
Mtr7g0065 818 PRINTS Leucine-rich repeat signature 124 137 - -
Mtr7g0065 818 PRINTS Leucine-rich repeat signature 295 308 - -
Mtr7g0065 818 ProSitePatterns Protein kinases ATP-binding region signature. 524 546 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g0065 Mtr-Chr7 1233754 1236531 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g0065 40 690 Receptor kinase-like Gene Family AT4G08850 34.290 4.07e-119 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mtr7g0065 Pkinase 2.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g0065 - - mtr:MTR_8g047210 1132.86