Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g0027 ATGGCTTCATCTTTGGAGCAGCTTCTTGCAGAGGAAGGGTTCAAAGCAAGCAGCAGAAAAGTGCAAAGGTCAAGATCTTCTTTCCATCATGGTGCTTCCAGTGATCCACTTCACTCCTTGGAAGATAGACTCTGCGTATCATCAAGTGAAAGAATTAAAACACAGAAAGCAAAGTCTAAAACAGCCTCAAAATATCAGATTAGCAATACAAGTGACAATAAAAACATTAGATCAAGTGATAATAATGTTTTTATAGGAAATAAGTTAAATAACGAACGGTTGAAGAACAATGAATCTGAGAAGAACAAGTCTTACAATTCATCAGATAGTGATAGTGGATTTGAAGATGCTTATTCAAACCAAGTGTCTAATGTGAAAAGAGGCAAAGAAAAGAAGGAACAATTGGGGGAAAAGCCATTGAAAGATTCATATATGCTTAGACAATTTAGTGGAAATAGAAAGAACATAAAACATCAAGAAAAATCACACTCTAGATCAAATAGTAATAGCAAAAACTATGAAGATAGCAAGAACAAAAATAGCAATCATGCTATGCAATTGCAAGATGCTTCTAGTCTTGCTATTGATGAAATTGCAGTGAAAGCACTAGTTTCCATTCTGAATGGATACATAGAAAGTTTTCTAATGGATGAAGATTTTCGGTCAGCGTTGCGCCACAATTGTTTCTCCTCTTTGAATTTCATTCAACTTGAGGAAGAACACAAGTCTGAGACCAAGGTGATTACAAGTCTTGAGCAAGCAATTGAGTGCATAGAAAAAACTGCTTCTGAGGAAACTATATCTGCAACACGTCTTAAAAGAGCAACAATGCAGCTTAGCATTATTACTGGTTTGAGTTTGAATGATCTCAAGTACGGTTTTACGTGCGGGATTCAAAATTTCAAGTTATCAGCTTGTGCTCATCTTTACCTCAGTGTTGTATATTTGATCCAAAGAAAAAAGAAAGTTTCGGCGAAGCATCTTTTGCAAGTGTTTTGCGACTCTCCTTTTCAGGCGCGGGCGATATTGTTGCCTGAACTTTGGGAGCGTCTATTTTCTTCGCAACTTTCTGATTTGAAGAAATGGTATAACAACAAGGAAGGTGAAATTGTTTTAGATATACAAAACAAAGCAAGAAAGATAAAGATTCTCCAGAAAGTGTATAATGAAAATTTGGATTCAGGAACTCAATTATTTGCTTTATATTACAAAGATTGGCTCAGTGAAGGAGTAGAAACTCCAACTATTCCTTCCATTGGCATTCCATCATTATCCATTACGAGTCGACAGGGAAGTTCACTTGGTCATTCTTTTGAGTCTTCTAGCTCCAACGAACCATTCTCACCACAGGCAATGGTCAGCAAGAAACTTTATGATTCTTTCTTTGGTAGTAAACCTCAAGTCTATGAAGTTGAACTTGATGAGGATGAAGATAGCTTTGAAAATTATGAGAGAGGTTCTTATGGTTCGACCATCGTTAAAAAAACATTAATATATGAATCAGAAACTGTTAAATATATTGATCAAAGTACTGAAGAGTTCACTCCAAGAGTACCAGTTCATGAATTCTATATACCTCGGAAAGGAACATCAAGGACAGCTGCAGAAGAATGGAAAGATAGGAATTCCAGAAATGCCACTAGAAAATATTTCTCCATAGAAACTAATTCAAACAGTCACATATTTAATGATCAACCACATGAAAAAGAAAATGAGATTTCTATCAAAAAGACGCAGCCAAATAAGATAACCTCTACTATTGATGGATCATATTCTCCAAGCATACCACAGGAATTTATTTGTCCTCTGACAAGAAATATCTTTGAGGAACCGGTTACCTTAGAGTCAGGTCAAACCTTTGAAAGAAAAGCCATCAAGGCATGGTTTCAAAAGGGAAACAGAACATGTCCAGTAACAGGAAATACTTTAGAATGTGTAGTCATACCATTTAGCAACCTTATTTTGAAGCGTTTGATCGATAACTGGAAGTCAGAAGATTTTGATCGCCTTCTTGATTTTGCCTCTCAAACGTTTGAAAATTCAAAGGAAATTAAGTTAAAAAAGCGCGACGAAGATATCGTTTTCAAGTTACAAGTTCTTTTATCTTCCTTGAAAAAAGAGGACAAATCAACTTATGCTAAGCATATAATCTCTTTAGGGGTTCTTTCATTTCTCTGTAGGAGGTTTGAACAAGGAAATTTGGAAGAAAAATCTCATGTGATCGAGATCTTGTTAAACTGTATCCGATCAGATTCTAGTTGCATATATAAGATAGCAAGGGGTGTCAACAGAAAATTTCTTCTTGAGCTTCTTCACAGTAAGGATGTTACCCCAACAAAAAATGCAATACTATTCCTTACTGAACTTTTGTCAATGAAGAGAAAGGATGTCACTTCTTTCATAAGTGGGTTGGTGGGAGAAGATGTAGTTAGTACAATGCATATTGTGCTCATGTATCTCAAGAATTCTTCTCCAATTGAAAAGCCCCTCATCGCTGTCCTCTTATTACACTTTGAACTACTGGTTGAGCAGCCTCAAAAGTTTAGCATATACATAGAGATGGCTGTGAAAGCCATTGCAGAGGCACTTGATGCCAGCTTAAATGATGACAAGGTTCAAAAGAAGTGTTGCAGAGCTATTTTAATCTTGTGTGGCCATTTTTCTTCCACTGGAATGATAACAAATAATACTAGCATCTTAAAGCAAGAAGGTTATAATAATGGTAGCTCAGAATTGAAATCTCCTAGCCTTGATGATGAGGATCAACGGCTAAATGTAACCATTTCATCGGAAGATGAAGAAGAAGAAATGGATGAAGAGTTCATGGCGAACTTGTTAGAATCAATGATTGGTGATGGAGAAAGTCTATTTTTGAAGACCATATCTAAATGTTTAGATTCTAGACATGTAGATTTGATGAGGGCTTGTCTAATAACTGTTACATGGTTGAGTTCCTCACTTTCTAAACAGTATAATGCTGGATTGCATCTTCCTGCTTTCTTAGCTATCATCTCTCAGCTGAAAGGAATCCTTGAAAATGGAGAACTTGAGCTCAAGGCTCTCGCATCTATGTCCTTGTTCAACTTCAGTAAAATATCAGAATGCAGAACACTTTTGAAGATTATGGCAGACGATATTGCTCCCCTTCTTCATGGACTAGTTGATGTATTATGGACTGCTAAGAAACTGCATGCCATTTTATATAGGGAGAATCTGTAG 3219 0.3625 MASSLEQLLAEEGFKASSRKVQRSRSSFHHGASSDPLHSLEDRLCVSSSERIKTQKAKSKTASKYQISNTSDNKNIRSSDNNVFIGNKLNNERLKNNESEKNKSYNSSDSDSGFEDAYSNQVSNVKRGKEKKEQLGEKPLKDSYMLRQFSGNRKNIKHQEKSHSRSNSNSKNYEDSKNKNSNHAMQLQDASSLAIDEIAVKALVSILNGYIESFLMDEDFRSALRHNCFSSLNFIQLEEEHKSETKVITSLEQAIECIEKTASEETISATRLKRATMQLSIITGLSLNDLKYGFTCGIQNFKLSACAHLYLSVVYLIQRKKKVSAKHLLQVFCDSPFQARAILLPELWERLFSSQLSDLKKWYNNKEGEIVLDIQNKARKIKILQKVYNENLDSGTQLFALYYKDWLSEGVETPTIPSIGIPSLSITSRQGSSLGHSFESSSSNEPFSPQAMVSKKLYDSFFGSKPQVYEVELDEDEDSFENYERGSYGSTIVKKTLIYESETVKYIDQSTEEFTPRVPVHEFYIPRKGTSRTAAEEWKDRNSRNATRKYFSIETNSNSHIFNDQPHEKENEISIKKTQPNKITSTIDGSYSPSIPQEFICPLTRNIFEEPVTLESGQTFERKAIKAWFQKGNRTCPVTGNTLECVVIPFSNLILKRLIDNWKSEDFDRLLDFASQTFENSKEIKLKKRDEDIVFKLQVLLSSLKKEDKSTYAKHIISLGVLSFLCRRFEQGNLEEKSHVIEILLNCIRSDSSCIYKIARGVNRKFLLELLHSKDVTPTKNAILFLTELLSMKRKDVTSFISGLVGEDVVSTMHIVLMYLKNSSPIEKPLIAVLLLHFELLVEQPQKFSIYIEMAVKAIAEALDASLNDDKVQKKCCRAILILCGHFSSTGMITNNTSILKQEGYNNGSSELKSPSLDDEDQRLNVTISSEDEEEEMDEEFMANLLESMIGDGESLFLKTISKCLDSRHVDLMRACLITVTWLSSSLSKQYNAGLHLPAFLAIISQLKGILENGELELKALASMSLFNFSKISECRTLLKIMADDIAPLLHGLVDVLWTAKKLHAILYRENL* 1073
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g0027 1072 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 594 667 IPR013083 -
Mtr7g0027 1072 CDD RING-Ubox_PUB 599 640 IPR045210 -
Mtr7g0027 1072 SUPERFAMILY ARM repeat 687 1054 IPR016024 -
Mtr7g0027 1072 MobiDBLite consensus disorder prediction 59 92 - -
Mtr7g0027 1072 MobiDBLite consensus disorder prediction 125 140 - -
Mtr7g0027 1072 MobiDBLite consensus disorder prediction 106 124 - -
Mtr7g0027 1072 PANTHER OS04G0584500 PROTEIN 1 1070 - -
Mtr7g0027 1072 Pfam U-box domain 595 665 IPR003613 GO:0004842|GO:0016567
Mtr7g0027 1072 SMART Ubox_2 598 662 IPR003613 GO:0004842|GO:0016567
Mtr7g0027 1072 MobiDBLite consensus disorder prediction 153 178 - -
Mtr7g0027 1072 MobiDBLite consensus disorder prediction 14 185 - -
Mtr7g0027 1072 Gene3D - 685 1062 IPR011989 -
Mtr7g0027 1072 PANTHER OS04G0584500 PROTEIN 1 1070 - -
Mtr7g0027 1072 SUPERFAMILY RING/U-box 591 665 - -
Mtr7g0027 1072 ProSiteProfiles U-box domain profile. 594 669 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g0027 Mtr-Chr7 526147 532110 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g0027 594 859 U-box Gene Family AT5G37490 24.468 8.16e-14 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g0027 - - ccaj:109801846 1266.14