Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g0024 CTAACTTTATTTCAAATTTTCAGCCTAACTTGGGATGCACAGGATGAAACATGTGGGATTTGCAGGATGGCCTTTGATGGATGCTGTCCTGATTGTAAACTTCCTGGGGATGACTGTCCACTCATTTGGGGTGCATGCAATCACGCATTTCATTTACATTGTATCTTGAAATGGGTGAATTCTCAAACCTCACAAGCACATTGCCCAATGTGTCGTCGGGAATGGCAATTTAAAGGTTGA 240 0.425 LTLFQIFSLTWDAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG* 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g0024 79 CDD RING-H2_APC11 15 77 IPR024991 GO:0005680|GO:0008270|GO:0031145|GO:0061630|GO:0097602
Mtr7g0024 79 PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 11 6 78 - -
Mtr7g0024 79 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 12 79 IPR013083 -
Mtr7g0024 79 PANTHER RING BOX 6 78 - -
Mtr7g0024 79 ProSiteProfiles Zinc finger RING-type profile. 29 72 IPR001841 -
Mtr7g0024 79 SUPERFAMILY RING/U-box 7 78 - -
Mtr7g0024 79 Pfam Anaphase-promoting complex subunit 11 RING-H2 finger 6 78 IPR024991 GO:0005680|GO:0008270|GO:0031145|GO:0061630|GO:0097602
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g0024 Mtr-Chr7 509759 511722 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g0024 29 72 C3H Transcription Factor Family AT1G72220 41.304 1.31e-06 42.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g0024 K03358 - ini:109182621 173.711