Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g0016 ATGTCAGGAATATGTTCTGCTTTTAACACCCCCAGGTTTGTTCTTAACAAGTTTTTAGCCAAATCTCAACGTGAAGGAGATGGTGCTGTTGTTAGAAGAGGCATTGGAAGAAGTGAGTTGAAGAACTTGGATCCTTTTCTAATGTTGGATCACTTCTCAGTATCTCCTCCTGGAGGATTTCCTGATCATCCACACAGAGGTTTTGAGACAGTCACCTACATGCTAGAGGGAGGTATAACTCATCAAGATTTTGCTGGCCACAAGGGTACAATAAGAACTGGTGATGTTCAGTGGATGACTGCAGGGAGGGGAATTATTCACTCTGAAATGCCTGCAGAAGCAAAAAACAATGGACTGCAATTGTGGATCAATTTAGCATCTAATGACAAAATGATTGAGCCAAACTATCAAGAACTTCTAAGTGAGAACATACCATCAGGAGAAAAAGATGGTGTTGAAGTGAGAGTGATAGCAGGAGAATCAATGGGAGTGAATTCACCTGTTTACACAAGAACACCAACCATGTTCCTTGATTTCACCATGATGCCAGGAACTCAAGTTCATCAAACTATTCCTGAGTTATGGAATTCATTTGCATACATAATTGAAGGAGAAGGTGTTTTTGGTTTACAAAATTCATCACCAATTGTGGCTCACCATATCATTGTTTTCACTCAAGGTGATGGACTTAGTGTTTGGAATAATAACTCTTCAAAGCCTTTGAGGTTTGTGCTCATTGGTGGACAACCATTGAATGAACCTATTGCTCAATATGGTCCTTTTGTCATGAATACACAATCTGAAATTGAGAAGACTATTGAAGATTATCAATATGGTAGGAATGGTTTTGAGATGAGGCTAAATTATAGGTCTCAATAG 879 0.3902 MSGICSAFNTPRFVLNKFLAKSQREGDGAVVRRGIGRSELKNLDPFLMLDHFSVSPPGGFPDHPHRGFETVTYMLEGGITHQDFAGHKGTIRTGDVQWMTAGRGIIHSEMPAEAKNNGLQLWINLASNDKMIEPNYQELLSENIPSGEKDGVEVRVIAGESMGVNSPVYTRTPTMFLDFTMMPGTQVHQTIPELWNSFAYIIEGEGVFGLQNSSPIVAHHIIVFTQGDGLSVWNNNSSKPLRFVLIGGQPLNEPIAQYGPFVMNTQSEIEKTIEDYQYGRNGFEMRLNYRSQ* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g0016 292 PANTHER PIRIN-RELATED 6 292 IPR012093 -
Mtr7g0016 292 Pfam Pirin 32 123 IPR003829 -
Mtr7g0016 292 SUPERFAMILY RmlC-like cupins 12 287 IPR011051 -
Mtr7g0016 292 CDD cupin_pirin_N 29 125 - -
Mtr7g0016 292 PIRSF Pirin 10 289 IPR012093 -
Mtr7g0016 292 PANTHER PIRIN-LIKE PROTEIN 6 292 - -
Mtr7g0016 292 CDD cupin_pirin_C 173 250 - -
Mtr7g0016 292 Pfam Pirin C-terminal cupin domain 176 282 IPR008778 -
Mtr7g0016 292 Gene3D Jelly Rolls 145 251 IPR014710 -
Mtr7g0016 292 Gene3D Jelly Rolls 25 277 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g0016 Mtr-Chr7 409074 412375 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g0016 9 285 Calmodulin-binding Proteins AT3G59220 65.468 3.68e-138 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g0016 K06911 - gmx:100775597 500.36