Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g0002 ATGGAGAAGATGAATTTTGTGAAGAAGAATGGTGAAGTGAGATTGCCACCAGGTTTCCGTTTTCATCCAACTGATGAAGAACTTGTTGTTCAATACTTGAAGCGTAAGGTCTTCTCTTTCCCTTTACCTGCTTCCATCATTCCTGAAGTTGATCTTTGCAAGTCTGATCCTTGGGATTTACCTGGTGATATGGAACAAGAGAGGTACTTTTTCAGTACCAAAGAAGCCAAATACCCAAATGGGAACCGATCTAACAGAGCTACAAACTCTGGTTACTGGAAAGCAACTGGTTTGGACAAACAAATCATGAATTCAAAGACTCATGAAGTTGCTGGTATGAAGAAAACTCTTGTTTTCTACAGAGGCAAACCTCCTCATGGTTCAAGAACTGATTGGATCATGCATGAATATCGCCTCACTTCTTCTCACTCCAACCCCCCCTTGAATGAAAATTGGGTTCTGTGTCGCATATTTCTCAAGAGGAGAAGTGGTGCTAAAAATGGAGAGGAGAGAGTAGTCAAAGGATTGAAGCCAAGCAGTGGCAGCAACTTTGGTGATGAGGTGAAGAAGAACTCAGCTTCAAGCTCAAATTCAAGTTCAAAAGTGGTGGTTTTCTATGATTTCTTGGCAGAGAAGAAGAACAATAATACGGATGCATCCTCCACCTCAATCACAATCTCACCAGCTAGCAGTGGAATCACAAATGAATTGGATGAACAAGAAAATGAAGACAGCAGTAAGTCACTCCCATCCTCTTTTGGAAATGCTTAA 771 0.4125 MEKMNFVKKNGEVRLPPGFRFHPTDEELVVQYLKRKVFSFPLPASIIPEVDLCKSDPWDLPGDMEQERYFFSTKEAKYPNGNRSNRATNSGYWKATGLDKQIMNSKTHEVAGMKKTLVFYRGKPPHGSRTDWIMHEYRLTSSHSNPPLNENWVLCRIFLKRRSGAKNGEERVVKGLKPSSGSNFGDEVKKNSASSSNSSSKVVVFYDFLAEKKNNNTDASSTSITISPASSGITNELDEQENEDSSKSLPSSFGNA* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g0002 256 ProSiteProfiles NAC domain profile. 15 160 IPR003441 GO:0003677|GO:0006355
Mtr7g0002 256 MobiDBLite consensus disorder prediction 215 236 - -
Mtr7g0002 256 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 6 252 - -
Mtr7g0002 256 PANTHER NAC DOMAIN-CONTAINING PROTEIN 83-LIKE 6 252 - -
Mtr7g0002 256 SUPERFAMILY NAC domain 11 160 IPR036093 GO:0003677|GO:0006355
Mtr7g0002 256 Gene3D NAC domain 24 164 IPR036093 GO:0003677|GO:0006355
Mtr7g0002 256 MobiDBLite consensus disorder prediction 167 195 - -
Mtr7g0002 256 Pfam No apical meristem (NAM) protein 16 139 IPR003441 GO:0003677|GO:0006355
Mtr7g0002 256 MobiDBLite consensus disorder prediction 215 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g0002 Mtr-Chr7 128087 129741 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g0002 1 246 NAC Transcription Factor Family AT5G13180 56.000 5.25e-95 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mtr7g0002 NAM 3.4e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g0002 - - var:108321729 328.946