Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2444 ATGGCACCATCATTCTTCATCACTTTCTTCTTTTCTATTAATCTCATCAACATTGCTTATTGTATTTCTGACATAGATTCTCTCCTTAAATTTAAAAACTCTCTTCAAAACACCGACGTTGCATTATCTTCATGGAATACATCCATGCCTCCATGTAATGCTGATAATGCAAATTGGGCGGGCGTTCTTTGTTACAAAGGACATGTTTGGGGATTTAAACTCGAAAACATGAACCTTAAAGGCAACATTGACATCGATTCCATCAAGGATTTACCGTATATCAGAACCATTAGCTTAATGAACAACCAATTCGATACCACATGGCCAGGCCTAAACAAACTCACCGGTCTTAAGAACATTTACCTTTCTAATAATAAATTCTCTGGCGAGATTCCAGCAGAGGCGTTTCAAGCGATGCAGTGGCTGAAGAAAATTTATCTCGACAATAATCAGTTCACTGGTCCTATTCCAACTTCCCTTGCTTCATTGCCGAGGTTGATATCTTTGCGGTTGGATGGAAACAAATTCACCGGTCCTGTTCCTGAATTTAGAGAAACGCTTAAATCATTCAGCGTAGCGAATAATCAATTAGAGGGTGAAATACCTGCCAACCTTAGCAAGATTCCAGCTTCATCTTTTTCTGGTAATGAAAAGCTGTGTGGAGCCCCTTTAGGAGCATGTTCGTCGAATAAGAAATCATCAATAAATTTGAGCCGTATCGTGGTCGTGGTTCTTGTAAGTCTTGCACTGCTTGTGATTGCAGCAGTAATATTATATGTCCTTGTTAAAAGAAGAAAAACTAAACAACAAGAAGAATTAGGAGAAGGAGCTGGAGTAGCTGCAAACACCAGCAACAGGGATAATAATAATCAAAAGAAAGGATCATCATCAAATAATAATACAGACGAGGGTTCGGTAAGATCACGCACAAGCAGTAATACCAGTAGCAGAAAAGGAGATAGCAAGTTGTCCTTTGTGAGGGAAGAAGTATCAGCACAATTTGATTTGCAAGATCTTTTGAGAGCCGCTGCTGAGATATTAGGAAGTGGTTGTCACAGTTCATCCTATAAGGCTGCTTTGTTGACTGGCCCTACTGTTGTCGTCAAAAGATACAAACAAATGAACAATGTTAATAGGCCAGAGTTTCAAGAGCACATGAGAAGACTAGGAAGGTTGAATCATCCGAATCTCCTTCCTCTCGTAGCTTACTACTACAAAAGAGACGAGAAACTTTTCATCACCGACTTTGTTCCCAATGGAAGCTTGGCCGTTCGCCTTCACGGATACCATTCTATAGGACAGGAAAGCCTTGACTGGCCAAGCAGGTTGAAGATAGTGAAAGGTGTAGCGAAAGGGATTGAATATCTATACAAGGAGTTGCCGAACTTGATTGCGCCTCATGGTCATCTTAAATCCTCAAATGTTCTATTGAACGAGTCATTAGAGCCTATACTAACCGACTACGGATTAGTACCAGTGATAAACCAGGATGTTGCTCATGAAATAATGGTTATATACGCGTCACCTGAGTATTTACAGCACGGGAGGATAACAAAGAAGACTGATGTGTGGAGTCTCGGTATACTCATTTTGGAAATTCTAACCGGAAAACTTCCTGCTAATTTCCTACAACAAAGTGGTAAAGGGAGCGAGTTGAGTTTAGCGAATTGGGTGGATTCTGTTGTACCGGAAGAGTGGAGTAGCGAGGTTTTTGATAAAGATATGGAGTTAACAAGTAATAATGAGGGGGAGATGGTTAAGCTTTTGAAGATTGCATTGGAATGTTGTGATATGGATATTGATAAAAGATTGGATTTGAAAGAAGCTGGTGAAAGAATTCAAGAGATACAAGAGAATAATCATGAAGATGATTTGAATTCTTCTTAG 1887 0.3975 MAPSFFITFFFSINLINIAYCISDIDSLLKFKNSLQNTDVALSSWNTSMPPCNADNANWAGVLCYKGHVWGFKLENMNLKGNIDIDSIKDLPYIRTISLMNNQFDTTWPGLNKLTGLKNIYLSNNKFSGEIPAEAFQAMQWLKKIYLDNNQFTGPIPTSLASLPRLISLRLDGNKFTGPVPEFRETLKSFSVANNQLEGEIPANLSKIPASSFSGNEKLCGAPLGACSSNKKSSINLSRIVVVVLVSLALLVIAAVILYVLVKRRKTKQQEELGEGAGVAANTSNRDNNNQKKGSSSNNNTDEGSVRSRTSSNTSSRKGDSKLSFVREEVSAQFDLQDLLRAAAEILGSGCHSSSYKAALLTGPTVVVKRYKQMNNVNRPEFQEHMRRLGRLNHPNLLPLVAYYYKRDEKLFITDFVPNGSLAVRLHGYHSIGQESLDWPSRLKIVKGVAKGIEYLYKELPNLIAPHGHLKSSNVLLNESLEPILTDYGLVPVINQDVAHEIMVIYASPEYLQHGRITKKTDVWSLGILILEILTGKLPANFLQQSGKGSELSLANWVDSVVPEEWSSEVFDKDMELTSNNEGEMVKLLKIALECCDMDIDKRLDLKEAGERIQEIQENNHEDDLNSS* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2444 628 ProSiteProfiles Protein kinase domain profile. 341 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g2444 628 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 5 624 - -
Mtr6g2444 628 SUPERFAMILY Protein kinase-like (PK-like) 345 616 IPR011009 -
Mtr6g2444 628 MobiDBLite consensus disorder prediction 271 322 - -
Mtr6g2444 628 Pfam Leucine rich repeat N-terminal domain 23 64 IPR013210 -
Mtr6g2444 628 Pfam Protein kinase domain 345 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g2444 628 Gene3D Transferase(Phosphotransferase) domain 1 417 627 - -
Mtr6g2444 628 Gene3D Ribonuclease Inhibitor 22 185 IPR032675 -
Mtr6g2444 628 Gene3D Phosphorylase Kinase; domain 1 305 416 - -
Mtr6g2444 628 Gene3D Ribonuclease Inhibitor 186 227 IPR032675 -
Mtr6g2444 628 Pfam Leucine rich repeat 116 176 IPR001611 GO:0005515
Mtr6g2444 628 PANTHER LRR RECEPTOR-LIKE KINASE 5 624 - -
Mtr6g2444 628 MobiDBLite consensus disorder prediction 281 320 - -
Mtr6g2444 628 SUPERFAMILY L domain-like 22 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g2444 Mtr-Chr6 42696635 42699138 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g2444 1 624 Receptor kinase-like Gene Family AT5G35390 48.837 0.0 605
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mtr6g2444 Pkinase 2.3e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g2444 - - gmx:100785189 781.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g2444 6 42696635 42699138 Mtr6g2444 6 42696635 42699138 ECH
Mtr8g3605 8 46640155 46643830 Mtr6g2444 6 42696635 42699138 PCT