Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2443 ATGTCTAGGTTGAATGGAGCAGAAAAAAAGTATGGTGCAGGACGTGTTGTGGCTGTGGCAATTGAGAATAATAAAACAAGCCAACATGCAGTTAAATGGGCTGTTGAAAATCTTCTTCCCAAAGATCAATGCCTCTTTTTAATCCATGTTAAACAAAAATCTAATTCTTCCACTTCCACACCATCCAACGACGAAGATGTCATGGATAGTGAATCCAGAGATCTTTTTGATTCATTTCGTGTCTTCTGCAATAGAAAAAATATACAATGCAATGAATTGTTGTTGGAAGATACAGATATACCAAAGGCATTAACAGAATGTATTTCCACTCATTCTATTGAGCTTCTTGTACTTGGGGCATGTTCAAAAGGCGGTATTGTTAGGTTCAGGACAACAGATGTTCCAACCTCAGTTTCAAAAGGAGCACCACCATTTTGCACTATATATATTATATCTAAAGGCAAAATATCAAGTGTTAAATCTGCAACAGCTCCAATTCCAAAACCAGCGGTCGTGGCGACGCCACAAACTATACCGCAGCGTGGCAACCAATTTCAACAGCCACATGCAATGCCAACGAGAAGTCCCGAACGATCAGATCCTCAAATGTTGCGTAACTACCCACCACGACCTTCAGCAGAGAGGCATGCAGCATATGGGATGAGGCAGGGGCTGGATGATGACCAAGAAATGATATCACCATTCAACCGGAGAGGAAACAAAGCTTACGAGTCATCGATTAATGAATCAGATATATCATTTGTGAGCAGTGGAAGACCGAGTATTGATCGAATATTTCCTTCATTGTATAACAATGATGATCTAGACTCCAATAGTAGTATTAGTAATGGACATCCTACTGGTAGGCTTTCATCCGAATACGATGCAAGAAACAGCTTCGCTTCATCCTATTCTGGTGGAGGACCAAGGTCGATTGACTTGTCGTCTCCTTTGGATAACTATTCATTCAGCTCCCAAGGCTCTAATGGTCCTTCTTCAATAAGGTTATCTGATGCCACCGATGAAGTCGAATCAGAGATGAGGAGGCTCAAGCTTGAACTAAAACAGACTATGGAAATGTATAGTTCAGCTTGCAAGGAAGCACTCACAGCCAAGCAGAAGGCAATAGAGCTTCAACGTTGGAGATCCGAAGAAGAAAAGAAGTTGGAAGAGGCAAGAGAAGGGGAAGGAGCAGCTATGGCTATGGTAGAGATGGAGCAAGAAAAATGTAAAGCTGCACTAAAAGCAGCTGAAGCATCTCAGAAGATCGCAACGTTGGAAGCACAAAAACGAATGTATGTAGAGAAGAAAAGCGAAATGGAAGCAAGTCAGAGGAAAAAGACGGAAGATTCTTATACCACTGCTAGATACAGACGATACAGTATTGAGGAAATTGAAGAGGCAACAAACCGGTTTTCCGATAGTCTTAAAATTGGTGAAGGAGGGTATGGTCCTGTTTTCAAATGTGAACTTGATCATACACCGGTTGCTATCAAAGTGTTGAAATCAGATGCAGCTCAAGGAAGGCAACAATTTAACCAGGAAGTTGAAGTGTTGAGTTGTATAAGACATCCAAACATGGTCCTTCTGTTGGGAGCATGTCCGGAATTTGGTTGCATAGTGTACGAGTACATGGCTAATGGAAGTTTGGATGATTGTTTGTTTAGGAGAGGTAAACAACCACCTCTTCCTTGGCAGTTGAGATTCCAAATTGCTGCTGAAATAGCCACTGGGCTTCTTTTCCTTCACCAGACTAAACCAGAACCGATTGTGCATCGTGACTTAAAACCTGGAAACATTTTGCTTGACCGAAACTATGTGAGCAAGATTGGTGATGTTGGTTTAGCAAGGCTTGTTCCTCCTTCTGTTCAAGACACTGTCACTCAGTATCGCATGACTTCGACTGCTGGAACTTTCTGTTATATTGACCCTGAATACCAGCAAACCGGCATGCTTGGTATCAAATCTGATATTTACTCACTTGGAATCATGCTTTTACAAGTGATTACCGCCAAACCTCCAATGGGTTTGACTCATCATGTTGGTAGATCTATTGAAAAGGGAACTTTTCTTGACATGCTTGATCCTGCTGTTCAAGACTGGCCTATGGAACACACCTTGCATTTCGCCAAACTTTGCCTTCAGTGTGCTGAAATGAGGAGAAAAGATAGACCTGATCTTGGAAAAATTGTGCTTCCTGAGCTCAACAAACTCAGAATATTCGCCGAAGAAAACATGCCTATGATGATGTTTAGAGGTGGTGCAGCAGCATTCAATCCTAGAAGTAACAACAATTATTTCATCAACTCCTCAACTTCTTCAACAAATCAAGACATTATGAGTCAATCTAGTTCTTTGTCTGGTAGCTCCGGATATGAAAGCCGTTCAAGCACGTCATCACCACTGGGAAGACTGTAA 2418 0.4169 MSRLNGAEKKYGAGRVVAVAIENNKTSQHAVKWAVENLLPKDQCLFLIHVKQKSNSSTSTPSNDEDVMDSESRDLFDSFRVFCNRKNIQCNELLLEDTDIPKALTECISTHSIELLVLGACSKGGIVRFRTTDVPTSVSKGAPPFCTIYIISKGKISSVKSATAPIPKPAVVATPQTIPQRGNQFQQPHAMPTRSPERSDPQMLRNYPPRPSAERHAAYGMRQGLDDDQEMISPFNRRGNKAYESSINESDISFVSSGRPSIDRIFPSLYNNDDLDSNSSISNGHPTGRLSSEYDARNSFASSYSGGGPRSIDLSSPLDNYSFSSQGSNGPSSIRLSDATDEVESEMRRLKLELKQTMEMYSSACKEALTAKQKAIELQRWRSEEEKKLEEAREGEGAAMAMVEMEQEKCKAALKAAEASQKIATLEAQKRMYVEKKSEMEASQRKKTEDSYTTARYRRYSIEEIEEATNRFSDSLKIGEGGYGPVFKCELDHTPVAIKVLKSDAAQGRQQFNQEVEVLSCIRHPNMVLLLGACPEFGCIVYEYMANGSLDDCLFRRGKQPPLPWQLRFQIAAEIATGLLFLHQTKPEPIVHRDLKPGNILLDRNYVSKIGDVGLARLVPPSVQDTVTQYRMTSTAGTFCYIDPEYQQTGMLGIKSDIYSLGIMLLQVITAKPPMGLTHHVGRSIEKGTFLDMLDPAVQDWPMEHTLHFAKLCLQCAEMRRKDRPDLGKIVLPELNKLRIFAEENMPMMMFRGGAAAFNPRSNNNYFINSSTSSTNQDIMSQSSSLSGSSGYESRSSTSSPLGRL* 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2443 805 Gene3D Phosphorylase Kinase; domain 1 441 544 - -
Mtr6g2443 805 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 5 804 - -
Mtr6g2443 805 MobiDBLite consensus disorder prediction 177 193 - -
Mtr6g2443 805 MobiDBLite consensus disorder prediction 317 341 - -
Mtr6g2443 805 Gene3D Transferase(Phosphotransferase) domain 1 545 747 - -
Mtr6g2443 805 Gene3D HUPs 14 151 IPR014729 -
Mtr6g2443 805 MobiDBLite consensus disorder prediction 769 805 - -
Mtr6g2443 805 CDD STK_N 16 154 - -
Mtr6g2443 805 Coils Coil 416 446 - -
Mtr6g2443 805 SUPERFAMILY Protein kinase-like (PK-like) 450 731 IPR011009 -
Mtr6g2443 805 Pfam Protein kinase domain 475 727 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g2443 805 PANTHER OS02G0152300 PROTEIN 5 804 - -
Mtr6g2443 805 ProSiteProfiles Protein kinase domain profile. 472 735 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g2443 805 MobiDBLite consensus disorder prediction 177 214 - -
Mtr6g2443 805 Pfam Universal stress protein family 15 143 IPR006016 -
Mtr6g2443 805 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 17 143 - -
Mtr6g2443 805 ProSitePatterns Serine/Threonine protein kinases active-site signature. 590 602 IPR008271 GO:0004672|GO:0006468
Mtr6g2443 805 Coils Coil 340 360 - -
Mtr6g2443 805 MobiDBLite consensus disorder prediction 317 338 - -
Mtr6g2443 805 MobiDBLite consensus disorder prediction 272 293 - -
Mtr6g2443 805 SMART serkin_6 472 741 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g2443 Mtr-Chr6 42685603 42688958 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g2443 1 753 Receptor kinase-like Gene Family AT1G78940 53.696 0.0 736
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Mtr6g2443 Pkinase 7.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g2443 - - cam:101511100 1217.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3607 8 46652005 46664864 Mtr6g2443 6 42685603 42688958 PCT