Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2440 ATGAAGAACTTTGGTATAAAGTTACAAAATCTTTGTATTTTCTTTCGCAACATTTTTCATGGTTTCTTGTTCATAAGAAAAAAATTCTTCCATGGTTCCTTGCCTCATGCTCTATCCTTCCAATTCCAATTCCAATTCCAATTCCAATTCAACAACTTTTTCATTCAACTATGTTATTTCATTATCCTTTCTTTTTTTGGTTACTTGGGTCTCAAGTTTTCTAAGCCAAAAACTTCTGTTAAACCAAAAGACTTTGATCTATTTTACACTTCTGTTTCTGCTTCCACTGTTTCTAGCATGACATCAATAGAAATGGAAGTTTTCTCTAATTCCCAACTTATTCTTCTTACTTTTCTTATGTTAGTTGGTGGTGAAGTTTTTACTTCCATGCTTCAACTTTTTCTTGATAGGTTCAATTTCACCCAAAAAGATTGTGTCAAAAATGAATGTAGTAGTTGTGTTAGTAGTACATCTCTCTCACATAAAATCCATCAAATGGAACTTGGTTCGGTTTCTATGCCTCAATCAGAAAATCATGATCAAATTGAAAAAAATAATATTAACGATAAAGATAAACTTAAGTATAATTCTCTTAGGTATTTAAGTTATGTAGTTTTGTGTTATCTTACTGTGGTTCATTTTTTTGGTTTTAGTTTGGTCACTTTGTACATAACCTATATACCAAGTGCTAAAAATATTCTCCAAAATAAAGGCATCAATATTGAAACATTTTCTTTATTTACAATAGTTTCAACATTTGCAAGTTGTGGTTATATCCCTACCAATGAGAACATGATGGTTTTCAAGAAGAATTCAGGACTTCTTCTTCTTGTTCTTCCACATGTACTTTTAGGTAATGCTCTATATGCACCATGTTTGAGGCTAATAATAACTTTTTTGAAAAGTATTACTAAAAGAGAAGAATTCTCTTACTTGCTGAATAATTCAAAGGAAATGGGTTATGATCATTTGCTCTCTACTCTTCATTGTTGGCACCTTGTTGGCACTGTCTTTGGTTTCAATGTGATACAATTTATATTGTTCTGTTGTATGGAGTGGAGTTCTAAGATTATGGAGGGACTAAATATCTATCAGAAATTAGTTGCATCTTTGTTTCAAGTTACAAATGTTAGACATTCTGGTGAATCTGTTTTTGATACATACTCCATCTCTTCTGCCATATTGGTGCTCTTCATTGTCATGATGTATCTTCCACCGTACACAACATTTTTACCAGTAAGGGACCAAAATGATGTGAAAAAAGACCAAAATAGCCTAGTGGATCGTATTATATTCTCTCAGCTATCTTATTTGGTTATTTTCATTATTCTCATTTGCATCACTGAGAGACAAAGCTTAAAAGATGATCCCCTCAACTTCAACGTCTTGACCATAACTCTTGAAGTCATAAGTGCTTATGGGAACGTAGGGTTGTCAACAGGATATAGCTGCTCAAGACAATTGAAACCTAATTTAATGTGCAGAGATTCATGGATTGGATTTTCAGGTAGATGGAGTACAGAAGGGAAGCTTATTCTTATCTTGGTAATGTTCTTTGAGACTCAAGAAATTCAATATGAATGGTGGCAAGGCATGGCACCTGTCCTAGCTAACAGGGTCAAAATTCTCTCCATTTAA 1638 0.3303 MKNFGIKLQNLCIFFRNIFHGFLFIRKKFFHGSLPHALSFQFQFQFQFQFNNFFIQLCYFIILSFFGYLGLKFSKPKTSVKPKDFDLFYTSVSASTVSSMTSIEMEVFSNSQLILLTFLMLVGGEVFTSMLQLFLDRFNFTQKDCVKNECSSCVSSTSLSHKIHQMELGSVSMPQSENHDQIEKNNINDKDKLKYNSLRYLSYVVLCYLTVVHFFGFSLVTLYITYIPSAKNILQNKGINIETFSLFTIVSTFASCGYIPTNENMMVFKKNSGLLLLVLPHVLLGNALYAPCLRLIITFLKSITKREEFSYLLNNSKEMGYDHLLSTLHCWHLVGTVFGFNVIQFILFCCMEWSSKIMEGLNIYQKLVASLFQVTNVRHSGESVFDTYSISSAILVLFIVMMYLPPYTTFLPVRDQNDVKKDQNSLVDRIIFSQLSYLVIFIILICITERQSLKDDPLNFNVLTITLEVISAYGNVGLSTGYSCSRQLKPNLMCRDSWIGFSGRWSTEGKLILILVMFFETQEIQYEWWQGMAPVLANRVKILSI* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2440 545 Pfam Cation transport protein 85 488 IPR003445 GO:0006812|GO:0008324|GO:0055085
Mtr6g2440 545 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 43 519 - -
Mtr6g2440 545 PANTHER SODIUM TRANSPORTER HKT1 43 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g2440 Mtr-Chr6 42645108 42650989 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g2440 72 519 Inorganic Solute Cotransporters AT4G10310 48.380 5.46e-140 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g2440 K24976 - gmx:100779582 633.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g2440 6 42645108 42650989 Mtr6g2440 6 42645108 42650989 ECH