Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2439 ATGGAGATCTTAGGTTGTTATATGAAAAAGTTTCAACTCCTTTGTAACACTTCATTTCAAAAATTTGCTTGTCTAACCAAATCATTTTTTTTCTTAGGAATATGTTTTTATCGCTTCATCCTCCTAAGAGCAAATCCATTATGTGTTCAAATTCTATATTTCATCTCTATTTCCTTTTTTGGGTTTGGATTTCTCAAAGCTCTAAACCCTTTATATCAAACATCACCTAAAAACTTAGATTTGTTCTTCACATCCGTTTCATCCACCACAGTTTCAAGCATGTCCACGGTTGAAATGGAATTTTTTTCTAACCCTCAATTAATCATCATTACCATCTTAATGTTCATAGGTGGTGAAATCTTTACCTCCATGTTAGGGCTTTATTTCATTAGATTAAAGCTCAAAACTGATCTAGGTAAAATCGATTCTTCTCATGCACGTTTTGCTTTTGCAAACCCCATCATTGTTGATCAAATTCAGATTGAAGTTGAAATGGTCACAAATTCTAACCCTCACATAACTTCCTTATCAAATCCAAACATTAAATCACATGAACCATTGAGTACCACAAGTGAAAATTTGAGGTATTTGTCTATGAAATATTTGGGTTATATAGTTCTTGGTTACATTATAATTCTACATATTATAGGTGTATTTGGGGTGTCTCTTTACCTTGCAATGATTCCTAGTGCTAAACAAGTACTAGAAAACAAGGGTCTAAAAATGTTCACATTTTCTCTTTTTACTATAGTTTCAACATTTTCAAGTTGTGGATTTATTCCAACAAATGAAAACATGGTTGTTTTTAGAAAGAATTCAGGTCTTCTTCTTATCCTCATTCCACAACTACTTCTTGGGAACACATTATACCCTCCATGCTTGAGATTTTGTATATGGGTATTGGGGAAATTCTATAAGAAGAAAGAGTGTAGGTATCTTTTGAACAATGTAGAGGAGGTTGGTTACAAACACTTGTTACATTGGAAACACACTCTTTATCTTATGGCTACTGTTTTTGGGTTTATTATTATTCAAGTTACTTTGTTTTGTCTAATGGATTGGAATTCAGAAGGTTTGAAAGAGTTGAATTATTATCAAAAATTGATTGGTGTGTTATTCCAAAGCATAAATTCAAGACACGCTGGAGAAACTATTGTGGACCTCTCAATTATATCACAAGCAATCTTGGTACTATTTGTCCTCATGATGTACCTTCCACCTTACACCTCATTCCTCCCTTGGGAAGACAATGGGAAAATGTCGGAAAGCAGTGAGAGAAAGCAGAATAAGAGAAGAGAAAAAGTAACAGAGAATAAAATATTATCTCGAATATCTTATTTAGTCATTTTCATCATACTAGTTTGCATAACTGAGAGGAAACAATTGAAGGACGATCCACTCAATTTCAATGTCTTCAATATTGCTGTTGAAGTTGTCAGTGCATATCAGAACGTAGGATTTACTATGGGATACAGTTGTGAACGACAGTTGCATCGAGAGGCAAATTGTGAAAACAAGTGGATTGGATTTGTTGGAAAATGGAGTGATGAGGGTAAGATCATTCTTATACTTGTTATGTTGCTTGGAAGACTCAAGAAATTCAACACGGATGCGGGTAATCCATGGAAACTTCTCTGA 1638 0.3388 MEILGCYMKKFQLLCNTSFQKFACLTKSFFFLGICFYRFILLRANPLCVQILYFISISFFGFGFLKALNPLYQTSPKNLDLFFTSVSSTTVSSMSTVEMEFFSNPQLIIITILMFIGGEIFTSMLGLYFIRLKLKTDLGKIDSSHARFAFANPIIVDQIQIEVEMVTNSNPHITSLSNPNIKSHEPLSTTSENLRYLSMKYLGYIVLGYIIILHIIGVFGVSLYLAMIPSAKQVLENKGLKMFTFSLFTIVSTFSSCGFIPTNENMVVFRKNSGLLLILIPQLLLGNTLYPPCLRFCIWVLGKFYKKKECRYLLNNVEEVGYKHLLHWKHTLYLMATVFGFIIIQVTLFCLMDWNSEGLKELNYYQKLIGVLFQSINSRHAGETIVDLSIISQAILVLFVLMMYLPPYTSFLPWEDNGKMSESSERKQNKRREKVTENKILSRISYLVIFIILVCITERKQLKDDPLNFNVFNIAVEVVSAYQNVGFTMGYSCERQLHREANCENKWIGFVGKWSDEGKIILILVMLLGRLKKFNTDAGNPWKLL* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2439 545 PANTHER SODIUM TRANSPORTER HKT1 37 544 - -
Mtr6g2439 545 Pfam Cation transport protein 194 499 IPR003445 GO:0006812|GO:0008324|GO:0055085
Mtr6g2439 545 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 37 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g2439 Mtr-Chr6 42632438 42638513 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g2439 66 544 Inorganic Solute Cotransporters AT4G10310 45.808 3.09e-139 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g2439 K24976 - vvi:100242150 573.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g2439 6 42632438 42638513 Mtr6g2439 6 42632438 42638513 ECH