Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2434 ATGAATATCCTAAGCACTTCATGCCAAAAACTTGTGTGTCTAAGCAAATCAATATATATCTCAGCAGCATGTTTATATCGATTCATCCTCCTAAGATCAAACCCACTATGTGTTCAAATTGTATATTTCATATCCATTTCAACTTTGGGTTTTGGATTTCTCAAAGCTCTAAAACCCTTAGGTCAAACACAAAAAAATTTAGATTTGTTCTTCACATCCGTTTCATCCACCACAGTTTCAAGCATGGTCACGGTTGAAATGGGAATTTTTTCTAACACTCAATTAATCATCATTACCATCTTAATGTTCATAGGTGGTGAAGTCTTTACATCATTGGTAGGACTTTTTTTCATTAGGTCAAGGCTCAAAATTGATTTAGATAAAATCGCGTCTTCACATGCACGTCTTGCTTCTCGAAACCCTTTCATTATTGTTGATCGATTTCACCTTGAAGATGAAATGGTCACAAACGAGGTACACAAACATGAATCTTTGAGTACAACAAATGAAAATTTGAGGTACTTGTCTATGAAATATTTAGGTTATGTAGTTATTGGTTACATTTTATTTCTACATGTTATAGGTGTAATTGGGGTGTCTCTTTACCTTACAATTATTCCTAGTACAAAACAACTACTAAAAAACAAGGGTCTAAAAATGTTGACATTTTCTGTTTTTACTATAGTTTCATCATTTTCAAGTTGTGGTTTTGTTCCAACAAATGAAAACATGATTGATTTTAGAAAGAATTCAGGTCTTCTTCTTATGCTTATTCCACAACTACTTCTTGGGAACACATTTTACCCTCCATGCTTGAGACTTTGCATATGTGGATTAGGGAAATTTTACAAGAAAAGAGAGTGTAGATATCTTTTGAAGCATTCAGAGAAGGTTGGTTACAAACACTTATTACAAAGGAAACACACTATTTTTCTTGTGGCTACTAATTGTGGGTTGATTGTGGTTCAAGTCACATTGTTTTGTGTAATGGATTGGAATTCAAAAGGTTTGAAGGGATTGAATTTTTATCAAAAATTGATTGGTGTTTTGTTTCAAAGTGTGAATTCAAGACATGCGGGAACAAGTATTGTGGATATCTCAATTCTATCACAAGCTATCTTGGTATTGTTTGTGGTAATGATGTACCTTCCTCCTTACACCTCATTCCTCCCATTGAAATATGATGGGAAAATTTCAGAAAACAGTAAGAAGATGAAAAAGAGAAGAGGAAAAGTTACAGAGAATTTGATATTTTCTCAACTCTCCTATTTAGTCATATTCATCATTCTAGTATGCATAACTGAGAGGAAAAAATTGAAGGAAGATCCTCTTAATTTCAACGTTTTGAATATTGTTGTTGAAGTTATCAGTGCATATGGGAACGTAGGATTTTCAACAGGATACAGTTGTGAACTACAGTTGCATCCAGAGACAAATTGTGAAAACAAATGGATTGGATTTGTTGGAAAATGGAGTGATGAGGGTAAGATCATTCTCATATTTGTTATGTTGTTTGGAAGGCTTAAAAAATTCAATATGGATGGAGGCAAAGCATGGAAGCTTCATTGA 1569 0.3346 MNILSTSCQKLVCLSKSIYISAACLYRFILLRSNPLCVQIVYFISISTLGFGFLKALKPLGQTQKNLDLFFTSVSSTTVSSMVTVEMGIFSNTQLIIITILMFIGGEVFTSLVGLFFIRSRLKIDLDKIASSHARLASRNPFIIVDRFHLEDEMVTNEVHKHESLSTTNENLRYLSMKYLGYVVIGYILFLHVIGVIGVSLYLTIIPSTKQLLKNKGLKMLTFSVFTIVSSFSSCGFVPTNENMIDFRKNSGLLLMLIPQLLLGNTFYPPCLRLCICGLGKFYKKRECRYLLKHSEKVGYKHLLQRKHTIFLVATNCGLIVVQVTLFCVMDWNSKGLKGLNFYQKLIGVLFQSVNSRHAGTSIVDISILSQAILVLFVVMMYLPPYTSFLPLKYDGKISENSKKMKKRRGKVTENLIFSQLSYLVIFIILVCITERKKLKEDPLNFNVLNIVVEVISAYGNVGFSTGYSCELQLHPETNCENKWIGFVGKWSDEGKIILIFVMLFGRLKKFNMDGGKAWKLH* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2434 522 Pfam Cation transport protein 163 479 IPR003445 GO:0006812|GO:0008324|GO:0055085
Mtr6g2434 522 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 23 521 - -
Mtr6g2434 522 PANTHER SODIUM TRANSPORTER HKT1 23 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g2434 Mtr-Chr6 42561416 42565451 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g2434 55 522 Inorganic Solute Cotransporters AT4G10310 47.934 4.28e-137 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g2434 K24976 - vvi:100248819 576.244
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g2434 6 42561416 42565451 Mtr6g2434 6 42561416 42565451 ECH