Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2418 ATGTTGAAGAGAGAGCAATGTGATTACACTAAACATGATTCTAGCTTCTCCCATTGGAAGATTCTTATTGGTCCTTCTGATTGGGAAGACTACTCCAAAGGAAAGGAAGGATCTACAAGATATAGAATCCATAACCTACCAGAAAATTCTGGACCTGGAGTCTATGAGCTCGGAGTAGCTGCATCGACTAGCGGGTTGGGGCGTGAAATTTACAAGCTTTCCACTGACTCGTGTCGAGTAGTTGTGGTTTATCTAGGAAAAGGTGATAATGTGAGAACAAGACTCCAATGTTATGGTAGAAATGGTGCTCATTTGGGTAATGGTTGTTCTTCATTTGAATCTTCTCACCAAAAGGGACACTCATTGTTTCATGAAATCTTTCTTCAAGGTTTCCCAATTGTTTATAGATGGGCTTCTATGCAGACCAAGGGAGATGCTTTGCAAACAGAATCTCAACTGCTGAGTACATTTGATTATGCTTGGAACACAATTAATAACGGTCCACGGCGTCCGGGTGATATTCTTGAAATGCTCAACAAAATTTCTTCAGACACAAGAACATTTTCAGATGTAGCCAAATCACTTCTACCCTTCACTCAAAAGAAAGTAGGGATACCAATTAAATCAAGCATGTTGCCTGTGAAAGATAACAAATCAAACGAAGTCGACAGTGGCAACTACAATTTCCTATCTCGCGTGTTCAAATTCAACCGTTCGCGTCCTAAGATAGTTCAAGATAAAGCTGATTTTTCCGTTGAGAAGAAAGATAAAATTTGTGGAGTGATTTTGGATGATGGTTCTATTTGTACAAAGACGCCGGTCGAGAAAAGAGTTAGGTGTCATGAACATAAAGGAATGAGAATAAGAACAGCAAAATCAGAATCAAAAAGAGGAAATGCTTGTAGGTACCAAAATATTAAACATGATGTTGAAGATCTTCCACAAACAGTGGTTGAGAGTCTTGTTGATGAGAGTATCACCAAAACTATTACATGTGGAATTATTTTGGAAGATGGAACCACTTGTAGAAGACAACCAGTTAAAGGAAGAAAAAGATGTCATGATCATAAAGGGAAGAGAATTCGTGCATTTGTTCCTATTAATTAG 1107 0.3839 MLKREQCDYTKHDSSFSHWKILIGPSDWEDYSKGKEGSTRYRIHNLPENSGPGVYELGVAASTSGLGREIYKLSTDSCRVVVVYLGKGDNVRTRLQCYGRNGAHLGNGCSSFESSHQKGHSLFHEIFLQGFPIVYRWASMQTKGDALQTESQLLSTFDYAWNTINNGPRRPGDILEMLNKISSDTRTFSDVAKSLLPFTQKKVGIPIKSSMLPVKDNKSNEVDSGNYNFLSRVFKFNRSRPKIVQDKADFSVEKKDKICGVILDDGSICTKTPVEKRVRCHEHKGMRIRTAKSESKRGNACRYQNIKHDVEDLPQTVVESLVDESITKTITCGIILEDGTTCRRQPVKGRKRCHDHKGKRIRAFVPIN* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2418 368 Pfam GIY-YIG domain-containing protein 16 175 - -
Mtr6g2418 368 PANTHER PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED 1 363 IPR038909 GO:0003677|GO:0006355
Mtr6g2418 368 PANTHER PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED 1 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g2418 Mtr-Chr6 42443589 42445742 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g2418 1 365 HRT Transcription Factor Family AT5G56780 41.799 1.21e-86 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HRT Mtr6g2418 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g2418 - - lang:109350609 435.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g2418 6 42443589 42445742 Mtr6g2418 6 42443589 42445742 ECH